Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq37644 91.5 1e-13 seq9473 91.5 1e-13 >seq37644 Length=6317 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||| ||| ||||| || || || || ||| ||||| | || ||||| | | Sbjct 4331 AATGCAGATTTACGTAAAAACTCTGACCGGGAAGACGGTCACTTTAGATGTTGAACCTTC 4390 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||| | ||||| | ||| |||||||| ||||||||||| ||||| ||||| Sbjct 4391 CGACTCAATTGAAGCGGTGAAAGAAAAAATTCAAGACAAAGAAGGGACCCCGCCTGATCA 4450 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || ||||| ||||| || || | || ||| | ||| ||||| Sbjct 4451 GCAGAGACTTATCTTCGCAGGCAAGCAACTTGAGGATGGGCGAACTCTCTCCGACTACAA 4510 Query 23790 CATACAAAAAGAGTCCAC 23807 || | || || ||||| Sbjct 4511 TATTGAGAAGGAATCCAC 4528 >seq9473 Length=1265 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || || ||||| ||||| |||||||||||||| || || || Sbjct 1095 AAAATGCAGATCTTCGTGAAGACTCTCACCGGAAAGACGATCACTCTCGATGTGGAGCCC 1154 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||| || | || | | || ||| || ||||| || || | || || ||| Sbjct 1155 TCTGACTCTATCGAGAACGTCAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCCGAT 1214 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACT 23775 || |||||| | || || ||||| || || || || |||| |||||| Sbjct 1215 CAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACT 1262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337405311718520