Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7091 105 5e-18 >seq7091 Length=10687 Score = 105 bits (116), Expect = 5e-18 Identities = 147/204 (72%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 29674 GTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29733 ||| ||||| ||||| |||||||| || || || || || |||||| | | || ||||| Sbjct 9427 GTGCGCATCACCCAGCGTGTGGACGAAGTCCCCGGGCTCGAGCCCGCTTGCCTGGGCCAT 9486 Query 29734 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC--C 29791 ||| ||| || || | ||| ||||||||| |||||||| || || ||||| | Sbjct 9487 CATCATCGTCAGCAGCGCATAGGAGGCGATGTTGAAGGGCACGCCCAGAAAGATGTCGGC 9546 Query 29792 CCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATG 29851 ||| | ||| ||||||||||| || ||| || ||| ||||| ||||| ||| | Sbjct 9547 GCTG--CGCTGATAGAGCTGGCAGGAAAGCCGGCCCTCGGCGACGTAGAACTGGAACAGG 9604 Query 29852 GCATGGCACGGAGGAAGGGCCATG 29875 ||| ||||| || | ||||||| Sbjct 9605 CAATGACACGGCGGCAAGGCCATG 9628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405437067777340