Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq10895 262 3e-65 >seq10895 Length=16309 Score = 262 bits (290), Expect = 3e-65 Identities = 604/901 (67%), Gaps = 28/901 (3%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 ||||| ||||||||| ||||| || | ||||| |||||||| ||||| || | || Sbjct 9839 ACACCGGCTTTTTGGTACTCGGAGACCCTTTTTTCAAAGAAATTGGTTTTCCCCTGTAGT 9780 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 ||||| | |||||||||||||| ||||| || | || || ||||||||| | || Sbjct 9779 GAAATCATATCCATAAAATCAAATGGATTGGTAGAATTATATACTTTTTCACATTGAAG- 9721 Query 4368 GCTACAAGCAATCG---GTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTA 4424 | ||| |||| | ||| | ||||||||| | ||| ||| |||| |||| ||| Sbjct 9720 --TTCAACCAATAGCCTGTCCGTTACAAATTCCAAATATTGGGTCATCAGTTTTGCGTTC 9663 Query 4425 ATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCT 4484 || ||||| | || |||||||| | | || | |||||| |||||||| | ||| Sbjct 9662 ATCCCAATGAGGCTTACAGGTAGGGATTCCGTAATAAACTCGCGTTCTATATCCAAGGCA 9603 Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA-------TCC 4537 | ||| | || | | | || | || || | || || || |||| | | Sbjct 9602 TTTGTTAGAATCTGTGTAATCCTCTCCTTGGGCACCTTGTTGACCAAGTGGTGGTTGTGC 9543 Query 4538 AAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGA 4597 ||| | ||| || |||| ||||||| ||||| || | | ||||| ||| || || Sbjct 9542 AAA---TGAACG-GCGTAATCGCAATGCATGCCTTCATCACGGGAAATCAATTCATTGGA 9487 Query 4598 AAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCC 4657 ||| || || ||||||||||| ||||| || || | |||||| || | ||| | ||| Sbjct 9486 AAAAGTCAACCCGGGCATTAACCCTCTTTTCTTCAACCAAAAAATGGAACAAAAAGCCCC 9427 Query 4658 AGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGC 4717 |||||||| || ||||| || |||||||| || | ||||| | || | ||| Sbjct 9426 GGAAAAGAAAATCCCTTCCACAGCGGCAAAGGCGATCAATCGTTCGGCAAA--ACTTGG- 9370 Query 4718 TTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTA 4777 | | ||||||| | | ||||| | || |||||||| | | |||| | | Sbjct 9369 ---GGAATCAATCCATCTAAGCGCCCAATCCGCCTTTTTCTTGATGGCTGGAAAGTTCTC 9313 Query 4778 TATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAG 4837 ||||| | ||| | | ||||||| | ||| | | ||| |||||||| | || Sbjct 9312 AATAGCCTGAAAAAGGATGTTTTTTTCCTTTTCGTCCTTTACATAGGTGTCTATCAACAG 9253 Query 4838 GCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGC 4897 | || |||| ||||| || || || || ||||| |||||||||||| | | || Sbjct 9252 GGAGTAGGTTTCGGAATGGATGTTCTCCATCATTATCTGGAATCCGTAAAAGAACTTGGC 9193 Query 4898 TTCTGTTACTTGAACTTCGTT-ACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGT 4956 || | ||| |||||||| ||||||| | || | || ||||| ||||| || || | Sbjct 9192 CTCCGAATATTGGACTTCGTTCACAAAAT-TCTCGGCCAAATTTTCATTTACAATCCCAT 9134 Query 4957 CACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTC-AGGCTTAAGT 5015 | || |||||||| ||||| | ||| ||||||||| ||||||| ||||| | Sbjct 9133 CGGATGCGGCAAAAAAGGCCAAGATATGTTTTATAAAGTAACGTTCGTCGTCACTTAATT 9074 Query 5016 TTT--TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACG 5073 | | ||||||| | ||||| | | |||||||| || || | |||||||| | | Sbjct 9073 TATCGTTCCAGTCAGATAAATCCTGATGTAAATCAATCTCCTCGGCGGTCCAAAAACAGG 9014 Query 5074 CTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATC 5133 | || |||||||||| ||| | ||| ||| | ||| || | ||| ||||||| Sbjct 9013 CCTCACATTTTTTGTACCATTCCCACAAATCGTGATGTTCAATGGGGAATATTACAAATC 8954 Query 5134 T 5134 | Sbjct 8953 T 8953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426286127397770