Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq7091 107 3e-18 seq5591 86.0 1e-11 >seq7091 Length=10687 Score = 107 bits (118), Expect = 3e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| || || ||||| || | | | ||||| |||||||| |||||||| Sbjct 9990 GACCGCACGGGGACCGGTACCCAGAGCATCTTCGGACATCAGATGCGCTTTGACCTCGGT 9931 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 | || || || || ||||||| |||||| | || || | || ||||| |||||||| Sbjct 9930 GCCGGTTTTCCCATGCTGACCACCAAAAAGCTGCATCTGAGGTCGATCATCCACGAGCTT 9871 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 ||||||||||| | || |||||||||||| || ||||| | ||||| || ||| Sbjct 9870 CTGTGGTTCCTACAGGGCGACACCAACATCGCCTATCTGAAGGCCAACGGCGTGCGGATC 9811 Query 202729 TGGGACGAATGGGC 202742 ||||| |||||||| Sbjct 9810 TGGGATGAATGGGC 9797 Score = 89.7 bits (98), Expect = 8e-13 Identities = 134/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349 || || || ||| | ||||||||||||||||| |||| | |||||||| || |||||| Sbjct 9573 CTTTCCTGCCAGCTCTATCAGCGCAGCGCCGACATCTTTCTGGGCGTGCCCTTCAACATC 9514 Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCA-GCAGGTCAACATGGTGGCCGAGGA 203408 ||||| ||||| | ||||| |||| | || || ||| | | | | | ||| ||| Sbjct 9513 GCCTCCTATGCGCTGCTGACGATGATGATGGCCCAGGCAAG-CGGGCTCGAGCCCGGGGA 9455 Query 203409 GTTCGTCTGGACAGGC--GGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGT 203466 |||||| ||| || |||||| | || || ||| ||||||| | |||||||| Sbjct 9454 CTTCGTC--CACACGCTGGGTGATGCGCACCTTTATGTGAACCATCAGCAGCAGGCCGAC 9397 Query 203467 CTGCAG 203472 |||||| Sbjct 9396 CTGCAG 9391 >seq5591 Length=63835 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2710 TGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCG 2769 |||||||||| |||||||| |||| ||||||||| |||||| ||||||||||| |||| Sbjct 57393 TGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAGTCCCG 57452 Query 2770 TCAGTCCTGCCA 2781 ||| ||| |||| Sbjct 57453 TCACTCCCGCCA 57464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786874516740000