Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq10895 277 3e-69 >seq10895 Length=16309 Score = 277 bits (306), Expect = 3e-69 Identities = 1012/1573 (64%), Gaps = 31/1573 (2%) Strand=Plus/Minus Query 76025 GTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAA 76084 ||||| ||||||| | || | || | || ||| ||| ||| || || | || Sbjct 11600 GTTTCAAAAATCTCTTGGTTCAATTCCTTGGCCTCATCACTGGTAAAGGGCAAACGCAAC 11541 Query 76085 AGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 76144 | |||||| | |||||| ||||| || ||||| | ||| || || ||||| | | ||||| Sbjct 11540 ATAATAAAGGTATCTGCCAGTCCTTGGACTCCCAAACCTATTGGCCTATGGCGCATATTG 11481 Query 76145 GAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTG 76204 ||| |||| ||||| | ||||| ||||| |||| || | |||| || || || Sbjct 11480 GAATTTTCCGCTTCCTTTACGGGGTAGTAATTCCTATCAATGACCCTATTAAGGTTCTTG 11421 Query 76205 ACAACTACTTT---AACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCACA 76261 || ||| |||| | | | ||| || |||||||| || || | ||| Sbjct 11420 GTCACCCGTTTTGTAACCTTGAACAATTCCTTGTGA---TCAAATTTGCCCCCTTTAACA 11364 Query 76262 AACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATAT 76321 ||||| |||||||||||| || | |||||||| ||||| |||| | || |||| Sbjct 11363 AACATGGGAAGAGCTATAGAGGCCAAGTTACAAACCGCTACTTCATCGGGGGAGGTATAT 11304 Query 76322 TGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTC 76381 | | |||||| || || ||||| | | |||||| || | || | || ||||| Sbjct 11303 TCCAATATCTCGGTACAAAGATTGGAAGATCGGATAGTACCCAAGTTCTTCTGATTGCTT 11244 Query 76382 TTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCG 76441 || || | ||||||||||| | | | || ||||| || |||||||| ||||| Sbjct 11243 TTACGATTGGCCGCATCCTTATAAAGCATATAGGGCGTTCCCGTCTCAATCTGGGATTCC 11184 Query 76442 ATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTC-TCTT-- 76498 | || || ||| | | || || |||| | |||| | ||| || ||| Sbjct 11183 AATATTTTTTCCCATAAATCCCTGGCCTTTACCGT---TTTGCGACCCTTATCCTCTGCC 11127 Query 76499 TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACAT 76558 ||||||| ||||| ||||||||| || | | | ||| || |||||| Sbjct 11126 TCATATTTCAAATATAGTTTTTCAAATTCCTCACTGTGATTTGAAAACAATCCTGGACAT 11067 Query 76559 TCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCA 76618 ||||| || ||||| || | ||| || ||| ||| || || ||||| || | ||| Sbjct 11066 TCATTGGGGCACATTAAGGTCCAATCTTCATTGGCCTCCACGCGCTTCATGAACAAATCT 11007 Query 76619 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTT 76678 || ||||| | || || ||||| |||| | |||||| ||||| ||||| Sbjct 11006 GGAATCCACATGGCGTAGAACAGATCACGGGCACGCATTTCTTCCTTTCCGTGGTTCTTC 10947 Query 76679 TTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACA 76738 || | || | || || | |||||| | |||||| || |||| ||| || || | | Sbjct 10946 TTCAATTCCAAAAAGTCAAAAATATCCGCATGCCAAGGCTCTACATAAATGGCAAAACTT 10887 Query 76739 CCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAAC 76798 || ||| || ||||| ||||| | || | || |||| |||| | || || | | Sbjct 10886 CCTTTTCGCTTCCCGCCTCCTTGATCAACGTAGCGTGCCGTGTCATTAAATACCCTTAGC 10827 Query 76799 ATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGA 76858 || || | ||| || || || |||||||| || || | ||||| ||| || ||| Sbjct 10826 ATAGGGACAATACCATTGGAAGTACCATTGGTACCGGCTATATATGATCCCGTAGCCCGA 10767 Query 76859 ATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTC 76918 | ||| ||| || || || ||||| || || || |||||| || | ||| Sbjct 10766 ACATTGTGAATGGAAAGTCCGATTCCCCCCGCAGATTGGGAGATTTTCGCGGTCTGCTTC 10707 Query 76919 AATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGAC 76978 || ||||| || || || || ||||| || ||| ||||| | || || ||| ||| Sbjct 10706 AAGGTGTCGTAAATACCATCGATACTGTCGTCCTTCATGGCCAATAGGAAGCAGGAGGAC 10647 Query 76979 ATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTT 77038 || || | | ||||| | || || | ||||| | |||||| ||||| ||||| Sbjct 10646 ATCTGCGGCTTGGGCGTTCCGGAGTTGAAGAGGGTAGGTGTTGCATGGGTGAAATATTTT 10587 Query 77039 TCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGA--TGAATTCCTA 77096 | || | || | || ||||| || | | || |||| |||| | || ||||| | Sbjct 10586 TTTGACATCAGCTCATAGGTTTCTATGGCAGAGTCCATAT--CATTTAAGTGGATTCCAA 10529 Query 77097 CAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACA 77156 | || || ||||||||||||||||| || ||||| | |||| || | || | | Sbjct 10528 CCGCAACGCGCATCAACATATGCTGGGGCCGTTCGGCTATCTTCCCGTTCAGCTTAAGGA 10469 Query 77157 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAA 77216 || ||| ||||| || || || || || || | |||| ||| || | | ||| | Sbjct 10468 GATAGGATCGCTCCAAGGTCTTGAAGCCGAAGTAATCGTATCCAAAATCACGATTGTATA 10409 Query 77217 TAATAACCGAATTTAGTTTGTCCTTATATTTGG---TAACAATATCCATGACAGTGGTAG 77273 | ||| ||||| ||||| ||| || || || | || ||| | || | | Sbjct 10408 TGATAGTCGAATCCAGTTTTTCCGAATTTTCGGAAATTACCTTATAGACCTCATCG---G 10352 Query 77274 AAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTA 77333 ||| || || | | | | || || | ||||| | ||| | | || || | ||| Sbjct 10351 AAAGAAGCGGGGCTTTTTTACCCGTTCTGGGATTTATATACTCGTACAAATCCTTCATGG 10292 Query 77334 CGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTA 77393 ||| ||| |||||| || | ||| |||| ||| || |||| || | ||| || | Sbjct 10291 TCTCGGAAAAGGATTTTTTGGTATTCTTATGTAAATTGGAAACGGAAATACGAGCGGCCA 10232 Query 77394 GAATTGCATAGTCAGGATGTTGTGTAGTG--CA-GGTGGCTGCTATTTCTGCCGCTAAAG 77450 ||||||| || ||| || |||||| || ||| || || || || || ||| Sbjct 10231 ATTTTGCATAATCCGGA---TGCGTAGTGGTCATGGTAGCAGCCTGCTCGGCGGCCAAAT 10175 Query 77451 TATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGGCTATTT 77510 | || || || ||| ||||| || | ||| || || | || || ||| || | || Sbjct 10174 TGTCCAACTCCGAAGTGGTAACACCATCATAAAGTCCCTCTATTACCCGCATAGCCACTT 10115 Query 77511 TGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATACGAGATGTGA 77570 | || || ||||| | || ||| | |||||||||| |||||| | | | |||| Sbjct 10114 TTATGGGGTCTACCAGTTC---GTTGAGGCCATAACATAGTTTTCTGACCCTTGCCGTGA 10058 Query 77571 TTTTATCAAACAT 77583 | ||||| ||||| Sbjct 10057 TCTTATCGAACAT 10045 Score = 215 bits (238), Expect = 7e-51 Identities = 607/919 (66%), Gaps = 25/919 (3%) Strand=Plus/Minus Query 46338 TTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 46397 ||||||||| || || | ||| || || ||||| ||||| || | | ||| || | Sbjct 9831 TTTTTGGTACTCGGAGACCCTTTTTTCAAAGAAATTGGTTTTCCCCTGTAGTGAAATCAT 9772 Query 46398 TTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAAT 46457 |||||||||||||| ||||| ||| |||||| | ||||| | || | ||| | Sbjct 9771 ATCCATAAAATCAAATGGATTGGTAGAATTATATACTTTTTCACATTGAAGTTCAACCAA 9712 Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517 || || || | || ||||| | ||| |||||| || ||||| || ||||| Sbjct 9711 TAGCCTGTCCGTTACAAATTCCAAATATTGGGTCATCAGTTTTGCGTTCATCCCAATGAG 9652 Query 46518 TTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 | || ||||| | ||||||| |||||| |||| ||| | |||| | || || Sbjct 9651 GCTTACAGGTAGGGATTCCGTAATAAACTCGCGTTCTATATCCAAGGCATTTGTTAGAAT 9592 Query 46578 CGATGTTACTGTTTCCT----CACTTGGTGGATGCATCAAATGTTTAAACAT-TAAACAT 46632 | ||| | | |||| ||| | || || || || || || | ||| Sbjct 9591 CTGTGTAATCCTCTCCTTGGGCACCTTGTTGAC-CAAGTGGTGGTTGTGCAAATGAACG- 9534 Query 46633 GCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCA 46692 || |||| ||||| | ||||||||| | ||| ||||| || ||||| || | ||| Sbjct 9533 GCGTAATCGCAATGCATGCCTTCATCACGGGAAATCAATTCATTGGAAAAAGTCAACCCG 9474 Query 46693 GGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATG 46752 ||||||| || | || || | |||||| || | |||| || |||||||| || Sbjct 9473 GGCATTAACCCTCTTTTCTTCAACCAAAAAATGGAACAAAAAGCCCCGGAAAAGAAAATC 9414 Query 46753 CCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACT--GGCATCATTATGAATCC 46810 ||||| ||||| || || |||| | || || | |||| || | || ||||| Sbjct 9413 CCTTCCACAGCGGCAAAGGCGATCAATCGTTCGGCAAAACTTGGGGA-----ATCAATCC 9359 Query 46811 ACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 46870 | || | |||||||| ||||||||||| | || | | || ||||| | ||| | Sbjct 9358 ATCTAAGCGCCCAATCCGCCTTTTTCTTGATGGCTGGAAAGTTCTCAATAGCCTGAAAAA 9299 Query 46871 GAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTG 46930 | | ||||||||| | || || ||||| || ||||| || || || |||| | Sbjct 9298 GGATGTTTTTTTCCTTTTCGTCCTTTACATAGGTGTCTATCAACAGGGAGTAGGTTTCGG 9239 Query 46931 AATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTA 46990 |||| ||||| || || ||||| ||||||||||| | | || || | | || | Sbjct 9238 AATGGATGTTCTCCATCATTATCTGGAATCCGTAAAAGAACTTGGCCTCCGAATATTGGA 9179 Query 46991 CCTC-TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAA 47049 | || | ||||||| || | |||||| ||||| || || ||||| || |||||| Sbjct 9178 CTTCGTTCACAAAAT-TCTCGGCCAAATTTTCATTTACAATCCCATCGGATGCGGCAAAA 9120 Query 47050 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTA---TTCCAGTCA 47106 || ||||| | |||||| ||||| || ||| ||| | | | |||| ||||||||| Sbjct 9119 AAGGCCAAGATATGTTTTATAAAGTAACGTTCGTCGTCACTTAATTTATCGTTCCAGTCA 9060 Query 47107 TTGATATCTTTTGA--TATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTT 47164 |||| | ||| || ||| | || || || ||||| || | ||||| ||||| Sbjct 9059 --GATAAATCCTGATGTAAATCAATCTCCTCGGCGGTCCAAAAACAGGCCTCACATTTTT 9002 Query 47165 TATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224 | ||| | ||| | ||| ||| || || || || || |||||||||| ||||| Sbjct 9001 TGTACCATTCCCACAAATCGTGATGTTCAATGGGGAATATTACAAATCTATCCTTATTTT 8942 Query 47225 -TTGCAAGTATAGGTTCCA 47242 ||||| ||||| |||| Sbjct 8941 CCTGCAA-AATAGGCTCCA 8924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711627145660800