Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq7091 102 1e-16 seq36698 84.2 3e-11 >seq7091 Length=10687 Score = 102 bits (112), Expect = 1e-16 Identities = 177/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 99519 AAAGGCGACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAAT 99578 ||||| ||||| || || || ||||| | | || || ||||| ||||| ||| | Sbjct 9996 AAAGGTGACCGCACGGGGACCGGTACCCAGAGCATCTTCGGACATCAGATGCGCTTTGAC 9937 Query 99579 TTGGCTGAAGGTTTTCCTCTGGTCACTACTAAGC-GCTGTCACCTCCGTTCTATTATTCA 99637 | | || |||||||| || | || || || |||| || || | || || || || Sbjct 9936 CTCGGTGCCGGTTTTCCCATGCTGACCACCAAAAAGCTG-CATCTGAGGTCGATCATCCA 9878 Query 99638 TGAACTCCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGT 99697 || || || |||||||| | || || ||||| | | || ||||| | |||||||| Sbjct 9877 CGAGCTTCTGTGGTTCCTACAGGGCGACACCAACATCGCCTATCTGAAGGCCAACGGCGT 9818 Query 99698 CACTATCTGGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCA 99757 |||||| |||| |||| | |||||||| ||| | || ||||| ||||| ||| Sbjct 9817 GCGGATCTGGGATGAATGGGCCGATGAGAACGGCGACCTGGGGCCGGTTTACGGGGCGCA 9758 Query 99758 GTGGCGGTCTTGGCC 99772 ||||||||| ||||| Sbjct 9757 GTGGCGGTCCTGGCC 9743 >seq36698 Length=9795 Score = 84.2 bits (92), Expect = 3e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 99555 TTTGGGCATCAAATGCGTTTTAAT-TTGGCTGAAGGTTTTCCTCTGGTCACTACTAAGCG 99613 ||||| |||| ||||| ||| | ||||| ||||||||||| |||||||||| || Sbjct 8771 TTTGGTTATCAGATGCGATTTGACCTTGGC-GAAGGTTTTCCCATGGTCACTACCAAAAA 8829 Query 99614 CTGTCACCTCCGTTCTATTATTCATGAACTCCTTTGGTTCCTGAAAGGGGATACCAATAC 99673 | || | || ||| | || ||||| |||||||| || || || ||||| |||| Sbjct 8830 ATTGCATTTGAAATCCATTGTCCACGAACTTCTTTGGTTTCTTAAGGGCGATACTAATAT 8889 Query 99674 CCAGTACCTGAAAGATAACGGCGTCACTATCTGGAATGAGTGGGAAAACGAGAACGGTGA 99733 || || | || ||||| || |||||||| || |||| | || || || || Sbjct 8890 TGGATATCTTCAGGAGAACGGGGTACGCATCTGGAACGAATGGGCCGATGAAAATGGAGA 8949 Query 99734 CTTAGGACCGGTATACGGAAAGCAGTGGCG 99763 ||| ||||| || ||||| | || ||||| Sbjct 8950 CTTGGGACCCGTCTACGGCCACCAATGGCG 8979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 732928814636400