Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq7091 159 2e-34 >seq7091 Length=10687 Score = 159 bits (176), Expect = 2e-34 Identities = 354/514 (69%), Gaps = 23/514 (4%) Strand=Plus/Minus Query 830 AAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGAC 889 |||| ||| ||||| || ||||| || | ||||| ||||| ||| |||| | ||| Sbjct 9995 AAGG-TGACCGCACGGGGACCGGTACCCAGAGCATCTTCGGACATCAGATGCGCTTTGAC 9937 Query 890 CTCACCGAGGGCTTCCC---GCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCG 946 ||| | || || || |||| ||||| |||| | || | | ||| | Sbjct 9936 CTCGGTGCCGGTTTTCCCATGCTGACCACCAAAAAGC---TGCATCTGAGGTCGATCATC 9880 Query 947 TACGAACTTCTGTGGTTCCT-CAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGG 1005 |||| |||||||||||||| ||| |||||||| ||| | || || | |||||| Sbjct 9879 CACGAGCTTCTGTGGTTCCTACAG-GGCGACACCAACATCGCCTATCTGAAGGCCAACGG 9821 Query 1006 CGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGC 1065 ||| |||||||| || |||||||| | ||| |||| || || || ||||| || Sbjct 9820 CGTGCGGATCTGGGATGAATGGGCCGATGAGAACGGCGACCTGGGGCCGGTTTACGGGGC 9761 Query 1066 GCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGC 1125 |||||||||| ||||| || | |||| | ||| | | || || |||||| | | Sbjct 9760 GCAGTGGCGGTCCTGGC----CGGCGCCGGACGGTCGCCAT--ATCGATCAGATCA-GCC 9708 Query 1126 CGC-CGTGGAGCTGCTTC-GCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGG 1183 | | |||| | || ||| ||| | || |||||| ||||| || || ||| Sbjct 9707 AGATCCTGGATCAACTGAAGCGCAATCCCA-ATTCCCGCCGGCTTGTGGTGTCGGCCTGG 9649 Query 1184 AACGTCGGTGACCTC-AGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTA 1242 || || | || || |||| |||||| | | ||||| || | |||||||| | || Sbjct 9648 AATGTGGCGGAGATCGAGCG-CATGGCCTTGCCGCCGTGTCATTGCCTGTTCCAGTTCTA 9590 Query 1243 CGTCGTCGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCG 1301 ||||| ||| |||||||| || |||| || |||| ||||||||||| ||||| || || | Sbjct 9589 CGTCGCCGAGGGCCGGCTTTC-CTGCCAGCTCTATCAGCGCAGCGCCGACATCTTTCTGG 9531 Query 1302 GTGTGCCGTTCAATATCGCCTCGTACGCGCTCCT 1335 | ||||| ||||| |||||||| || ||||| || Sbjct 9530 GCGTGCCCTTCAACATCGCCTCCTATGCGCTGCT 9497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295601781267690