Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq61271 104 2e-17 seq2194 84.2 2e-11 >seq61271 Length=4009 Score = 104 bits (114), Expect = 2e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 100843 tGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTA 100902 |||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| | Sbjct 2041 TGCGAAAATAGCTCAGTTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGTTCGAA 2100 Query 100903 ACCCGTTCTTCGCTC 100917 |||||| ||||||| Sbjct 2101 TCCCGTTTTTCGCTC 2115 >seq2194 Length=6806 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 120473 GGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCGATCGAT 120532 |||||||| ||||||| |||| ||| |||| ||||| |||||||| ||||| Sbjct 1998 GGCCGTGGTTCCGCCGCGAACTCGGCCGTCTGCTACTATCTGGGCGTCACCTCGGTCGAT 2057 Query 120533 CCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGCCCCGACTTTCCC 120592 || ||| ||||||| ||||||| |||||| || | | || || ||| ||| Sbjct 2058 CCCGCGAAGATCGACCTGCTGTTCGAACGCTTCGTCTCCGCTGAGCGGGGCGAGCCGCCC 2117 Query 120593 GACATCGACGTCGACTTCCAG 120613 |||||||||||||||||| || Sbjct 2118 GACATCGACGTCGACTTCGAG 2138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514079639118000