Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq1150 89.7 6e-13 seq606 82.4 8e-11 >seq1150 Length=48029 Score = 89.7 bits (98), Expect = 6e-13 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 363 AGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTATCCAGCTGAGCTA 419 ||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| Sbjct 19344 AGGATTCGAACCTGCGACCTACGGATTAGAAGTCCGTTGCTCTATCCAGCTGAGCTA 19400 >seq606 Length=5396 Score = 82.4 bits (90), Expect = 8e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 47308 GGCGGTCAGCACCTGAACGTTAACGTGTTGCGTCGCGAAACCTTGCTGGATGCGGTTGAG 47367 ||||| || || | ||||| ||||| ||| || ||||| ||||||| ||| | ||| Sbjct 3169 GGCGGCCACCATATCAACGTCAACGTCTTGAACCGGGAAACGCTGCTGGAGGCGATGGAG 3228 Query 47368 CACCCAGAAAAATACCCGCAGCTGACTATTCGCGTTTCCGGATACGCGGTGCGCTTCAAC 47427 || || || || || ||||||||||| ||||| || ||||| || || || ||||| | Sbjct 3229 CATCCGGAGAAGTATCCGCAGCTGACCATTCGGGTCTCCGGCTATGCCGTCAACTTCATC 3288 Query 47428 TCCTTGACACCAGAACAGCAGCGCGACGTTATC 47460 |||| | | |||||| ||||||||| Sbjct 3289 AAGCTGACCCGCGCCCAGCAGGAAGACGTTATC 3321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538907630263200