Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031107.1 Length=246291 Score E Sequences producing significant alignments: (Bits) Value seq7091 156 7e-33 seq36698 125 1e-23 seq80178 86.0 1e-11 seq54012 86.0 1e-11 seq141111 84.2 3e-11 seq42531 84.2 3e-11 >seq7091 Length=10687 Score = 156 bits (172), Expect = 7e-33 Identities = 222/310 (72%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 201778 GATAATGCACACCATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGA 201837 || || || | || |||| |||||||| || | |||||| || || || | ||| | Sbjct 10060 GAAAAGGCCCGCCGTGAAGCAATATCTCGATCTCCTGCGTCTGGTGCGAGAGCA-GGGCA 10002 Query 201838 TGTA-AAAGCCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCT 201896 || |||| ||||| || || || || |||| | ||||||| |||||||||| Sbjct 10001 GTTACAAAGGTGACCGCACGGGGACCGGTACCCAGAGCATCTTCGGACATCAGATGCGCT 9942 Query 201897 TTAACTTACAAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCA 201956 || || | | |||||||| || | |||||||||||| | || || | || |||| Sbjct 9941 TTGACCTCGGTGCCGGTTTTCCCATGCTGACCACCAAAAAGCTGCATCTGAGGTCGATCA 9882 Query 201957 TCCATGAGCTGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACA 202016 |||| ||||| ||||||||||| ||| |||||||||||| ||| |||| | |||| Sbjct 9881 TCCACGAGCTTCTGTGGTTCCTACAGGGCGACACCAACATCGCCTATCTGAAGGCCAACG 9822 Query 202017 ACGTCACCATCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTA 202076 ||| |||||||| |||||||| ||| | ||||| ||| | || ||||| ||||| Sbjct 9821 GCGTGCGGATCTGGGATGAATGGGCCGATGAGAACGGCGACCTGGGGCCGGTTTACGGGG 9762 Query 202077 AGCAATGGCG 202086 ||| ||||| Sbjct 9761 CGCAGTGGCG 9752 >seq36698 Length=9795 Score = 125 bits (138), Expect = 1e-23 Identities = 212/307 (69%), Gaps = 0/307 (0%) Strand=Plus/Plus Query 201788 ACCATGAAACAATATCTGGACTTACTGCGTGATGTTCGCGAAAACGGGGATGTAAAAGCC 201847 |||||||||||||| | || |||||| |||||| |||||||| | | |||| Sbjct 8681 ACCATGAAACAATACCACGATTTACTGAAGCATGTTCTTGAAAACGGTAACGAAAAACAA 8740 Query 201848 GACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAA 201907 || | || || || ||||| || ||| || || |||||||| ||| || | Sbjct 8741 GATAGGACAGGAACTGGCACTCTAAGTGTATTTGGTTATCAGATGCGATTTGACCTTGGC 8800 Query 201908 GAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTG 201967 ||||||||||| ||||||| |||||||| | || | || || |||| || || Sbjct 8801 GAAGGTTTTCCCATGGTCACTACCAAAAAATTGCATTTGAAATCCATTGTCCACGAACTT 8860 Query 201968 CTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATC 202027 || ||||| || | ||| || || || || ||| | | || ||| || |||| Sbjct 8861 CTTTGGTTTCTTAAGGGCGATACTAATATTGGATATCTTCAGGAGAACGGGGTACGCATC 8920 Query 202028 TGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCGT 202087 ||| |||||||||| ||| |||| || ||||| || || || ||||| | ||||||||| Sbjct 8921 TGGAACGAATGGGCCGATGAAAATGGAGACTTGGGACCCGTCTACGGCCACCAATGGCGT 8980 Query 202088 AGCTGGA 202094 | |||| Sbjct 8981 AATTGGA 8987 >seq80178 Length=370 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 4033 GTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCT 4089 |||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| Sbjct 60 GTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAAGTTCAAGTCT 4 >seq54012 Length=385 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 4033 GTAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCT 4089 |||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| Sbjct 326 GTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAAGTTCAAGTCT 382 >seq141111 Length=1569 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 4034 TAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCT 4089 ||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| Sbjct 1 TAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAAGTTCAAGTCT 56 >seq42531 Length=1504 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 4034 TAGCTCAGTTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTAGTTCAAGTCT 4089 ||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| Sbjct 1 TAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAAGTTCAAGTCT 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786558297632400