Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq7091 163 4e-35 seq36698 127 3e-24 >seq7091 Length=10687 Score = 163 bits (180), Expect = 4e-35 Identities = 183/245 (75%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 196065 AAAGCTGACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGAC 196124 |||| |||||| || || || || ||| || ||||| |||||||||| |||||| Sbjct 9996 AAAGGTGACCGCACGGGGACCGGTACCCAGAGCATCTTCGGACATCAGATGCGCTTTGAC 9937 Query 196125 CTGCGCAAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCAC 196184 || | || || || || | |||||||||||| |||| ||| | || ||||||||| Sbjct 9936 CTCGGTGCCGGTTTTCCCATGCTGACCACCAAAAAGCTGCATCTGAGGTCGATCATCCAC 9877 Query 196185 GAACTGTTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTC 196244 || || |||||||||| | ||||||||||||||| |||||||| | |||| ||| Sbjct 9876 GAGCTTCTGTGGTTCCTACAGGGCGACACCAACATCGCCTATCTGAAGGCCAACGGCGTG 9817 Query 196245 AGTATCTGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAG 196304 | ||||||||||| ||||| ||||| | ||||| || || || || ||||| |||| Sbjct 9816 CGGATCTGGGATGAATGGGCCGATGAGAACGGCGACCTGGGGCCGGTTTACGGGGCGCAG 9757 Query 196305 TGGCG 196309 ||||| Sbjct 9756 TGGCG 9752 >seq36698 Length=9795 Score = 127 bits (140), Expect = 3e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 196101 TTCGGGTATCAGATGCGTTTTGACCTGCGCAAAGGGTTCCCGCTGGTCACCACCAAAAAG 196160 || || ||||||||||| |||||||| || |||| || || ||||||| |||||||| Sbjct 8771 TTTGGTTATCAGATGCGATTTGACCTTGGCGAAGGTTTTCCCATGGTCACTACCAAAAAA 8830 Query 196161 TTGCACCTGCGATCTATCATCCACGAACTGTTGTGGTTCCTGAACGGCGACACCAACATC 196220 ||||| || ||| || |||||||||| | ||||| || || ||||| || || || Sbjct 8831 TTGCATTTGAAATCCATTGTCCACGAACTTCTTTGGTTTCTTAAGGGCGATACTAATATT 8890 Query 196221 CAGTATCTGAAAGACAACAACGTCAGTATCTGGGATGAGTGGGCAGATGAAGATGGCGAT 196280 ||||| | || ||| || | |||||| | || ||||| |||||| |||| || Sbjct 8891 GGATATCTTCAGGAGAACGGGGTACGCATCTGGAACGAATGGGCCGATGAAAATGGAGAC 8950 Query 196281 CTTGGCCCCGTCTACGGTAAGCAGTGGCGT 196310 | || ||||||||||| | || |||||| Sbjct 8951 TTGGGACCCGTCTACGGCCACCAATGGCGT 8980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 768894745460400