Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq2293 87.8 1e-12 >seq2293 Length=89781 Score = 87.8 bits (96), Expect = 1e-12 Identities = 124/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 46291 GAGGAGATCGCCAGTCTGCCATTCATCTACCCCCACGTTGCGCTGATGCCAGATGCTCAC 46350 ||| | ||||| | ||||| |||||| | |||||||||| ||||| || | ||| Sbjct 22982 GAGAACATCGCGCGGCTGCCGTTCATCCATTCCCACGTTGCCGCCATGCCTGACGTTCAT 22923 Query 46351 GCAGGCAAGGGGTCTGCCGTGGGCACGGTGATCCCCACCAAGGACGCCGTCATCCCAGCG 46410 ||| || | | ||||| |||||||| ||||||||| || || | || ||| Sbjct 22922 CTCGGCCGTGGCGCCACGGTGGGTTCGGTGATCGCCACCAAGGGTGCGATCGTGCCGGCG 22863 Query 46411 GCCGTGGGTGTCGACATCGGTTGCGGGATGATCGGCG-TGGAGACCTGGGTC 46461 || || || ||||||||||| ||||| ||||| |||| || ||||| |||| Sbjct 22862 GCGGTCGGCGTCGACATCGGCTGCGGTATGAT-GGCGATGCGGACCTCGGTC 22812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313349195891730