Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq13327 416 3e-111 seq303 389 4e-103 seq11659 93.3 5e-14 >seq13327 Length=3816 Score = 416 bits (460), Expect = 3e-111 Identities = 610/863 (71%), Gaps = 0/863 (0%) Strand=Plus/Minus Query 164042 GCTCCTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGA 164101 || || || || || || ||||| || || || || || | || || || | || ||| Sbjct 2711 GCACCGCCAGTAGATATTGATGGAATTCGTGAGCCAGTTTCAGGCTCTCTTCTATACGGA 2652 Query 164102 AACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTAC 164161 || || || ||||| || || || | || ||| || ||||| ||| |||| || || Sbjct 2651 AATAATATTATCTCAGGAGCCGTAGTACCGAGTTCAAATGCTATTGGTATGCATTTGTAT 2592 Query 164162 CCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTC 164221 | | || || || || | || ||||| | || ||||| || |||| |||| || Sbjct 2591 ACGGTGTGAGATGCGATGTGTATTGAGGAATGATTGTATAACGGAGGACCTTACCAATTC 2532 Query 164222 GTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCT 164281 ||||| | || ||| | || || | | || | ||||||||||| ||| | | Sbjct 2531 GTTGTACTACATTTCTTAATCGGGGTAGCATCATATCTTGGTCGTGAGTGAGAATTAAGT 2472 Query 164282 TACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCG 164341 |||||| | || ||||||||||| |||| |||||| | |||||| || || || ||||| Sbjct 2471 TACCGTTTAGGAATGCGTCCTTGAATTTTCGTAGCTTTCTCTGCACCAGTTGCAGCAGCA 2412 Query 164342 AGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTG 164401 || || || || || || || |||| ||||| ||||| || |||| ||||||||| Sbjct 2411 TCGGCTGTATTTCTAGTTTACCCAATCGGACAAGGATCTTTTTCAGATGGAATGCCTCTA 2352 Query 164402 GGCATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATG 164461 || || |||||||| ||||||| |||| | || |||||||| ||||| || ||| | ||| Sbjct 2351 GGAATTTCTGGAACATTCAACTTCATGCTAGTATTCCAGGCAGAGCATAATATCTTAATG 2292 Query 164462 CACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATG 164521 ||||| ||||| ||| || || ||||| || ||||| || ||| | || ||||| ||| Sbjct 2291 CACCCTTTCCACATGGCTGGAGTGGCAGGAGTATTTGGAGGATCTTTATTTAGTGCTATG 2232 Query 164522 CACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAAC 164581 || || || | ||||| || | | || | ||| | ||| |||| || | || Sbjct 2231 CATGGATCTTTAGTTACATCAACTTTAATTTCTATGACTAGTGAAGATGAATCACCTAAT 2172 Query 164582 TATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTAC 164641 ||||| || || || || |||||| | ||||| || || ||||| ||||| ||||| ||| Sbjct 2171 TATGGGTATAAATTCGGACAGGAATATGAAACATATAATATCGTAGCCGCGCACGGATAC 2112 Query 164642 TTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTC 164701 || || ||||| || || |||| ||| || || ||||| ||||| | ||||||||| Sbjct 2111 TTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTAATAACTCACGTTCTTTACACTTCTTC 2052 Query 164702 CTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCA 164761 || ||| || || || || || ||||| || || || |||| |||| || ||||| Sbjct 2051 CTTGCAATTTGACCGGTAGTTGGAATCTGATTAACAGCAATGGGAATTAGTACTATGGCT 1992 Query 164762 TTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTC 164821 ||||| || || || ||||| |||||||| || ||||| |||| | || ||||| | Sbjct 1991 TTCAATCTAAATGGATTCAATTTCAACCAATCAATCATTGATGCAGAAGGACGTGTAATT 1932 Query 164822 AACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGT 164881 | || || || | | || ||||| ||| || |||||||| ||||| |||||| Sbjct 1931 TCGAGTTGAGCCGATATCTTAAATCGTGCAAATCTAGGAATGGAAGTAATGCATGAGCGT 1872 Query 164882 AATGCTCACAACTTCCCTCTCGA 164904 || || ||||| |||||||| || Sbjct 1871 AACGCGCACAATTTCCCTCTAGA 1849 >seq303 Length=42796 Score = 389 bits (430), Expect = 4e-103 Identities = 678/979 (69%), Gaps = 8/979 (1%) Strand=Plus/Minus Query 165195 TTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGG 165254 ||||||||||| || ||| | | |||||||| || |||||| | || | || || || Sbjct 27668 TTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGA 27609 Query 165255 CTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTT 165314 || || ||||||||||| || ||||||||| |||| || || || | |||||| Sbjct 27608 TTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTA 27549 Query 165315 GAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCT 165374 || ||| || ||| | ||||| || || || || || || | ||||| || || Sbjct 27548 GAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCG 27489 Query 165375 CTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTC--ATCCGCTGGTGCCAACTTG 165432 ||| | | | || ||||| || |||| ||||||| | || |||| ||| ||| Sbjct 27488 CTTTTATTACCTTGAGGTCCCGAAGCTCA--GGGACTTTTAACTCGATGGTATCAAGTTG 27431 Query 165433 GGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTC 165492 | || | || | |||| | || | || || |||| | | ||| || || || Sbjct 27430 GAGGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGTTTA 27372 Query 165493 -GCCAGTTTGAACTGGCACGACTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCT 165551 | || |||||| | ||| | | | ||||||| || ||||| ||||||||| | Sbjct 27371 AGACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTCACC 27312 Query 165552 GGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGGACAATCGTCCTGG 165611 ||||| ||||| || || || ||| ||| | || |||||| | || ||| || || Sbjct 27311 GGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGA 27252 Query 165612 TTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGG 165671 || || ||||| || || || || || || || |||| | || ||| | |||||| Sbjct 27251 TTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGG 27192 Query 165672 TTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGGTATCTTAGGCGGA 165731 || |||||||| || |||||||| || || |||||||| || |||||||| ||||| || Sbjct 27191 TTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGT 27132 Query 165732 GCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAA 165791 || || | |||||||| ||||| | || ||| | ||||| || ||| ||||||||| Sbjct 27131 GCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTG 27072 Query 165792 CAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAACTTATTCCATGGTC 165851 |||| || || ||| || || ||| || |||||||| ||||| Sbjct 27071 TCGTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGTA 27012 Query 165852 ACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGCTT 165911 || || || ||||| || |||||||||||||| | ||||| || ||||||||| | Sbjct 27011 ACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTTA 26952 Query 165912 CACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATT 165971 || ||||||||| | || || || || | || | || || | || |||| || || Sbjct 26951 CATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGTT 26892 Query 165972 GGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCTGCTGAG 166031 ||||| || | ||| | | || || |||||||||||||| ||| | |||| || || Sbjct 26891 GGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGAA 26832 Query 166032 GATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATGAAGGACTCCGTGCC 166091 ||||| || || |||||||| ||||| ||||| || | |||||||||||| ||||||| Sbjct 26831 GATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGCT 26772 Query 166092 TGGTTGGCTCCTGTAG-ACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAAGTCTTGCC 166150 || ||||| || || ||||||||||||| || || | ||||| || ||||| || || Sbjct 26771 TGAATGGCTA-TGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTACC 26713 Query 166151 AAGAGGCAACGCACTTTAA 166169 | || || || || ||| Sbjct 26712 TCGCGGAAATGCTCTCTAA 26694 >seq11659 Length=22639 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/73 (90%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 159818 TCTATGGGTCA-GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGG 159876 |||| ||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||| Sbjct 16970 TCTA-GGGTCGCGTAGCTCAGCTGGATAGAGCATCTGCCTTCTAAGCAGACGGTCACAGG 17028 Query 159877 TTCGAGTCCTGTC 159889 ||||| ||||||| Sbjct 17029 TTCGAATCCTGTC 17041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556631870950800