Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq37644 93.3 1e-13 seq9473 87.8 4e-12 >seq37644 Length=6317 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964 || || || || || | || ||||| |||| | ||||| |||||| || || || Sbjct 4531 AGGGTGGATTCCTTCTCAATATTGTAGTCGGAGAGAGTTCGCCCATCCTCAAGTTGCTTG 4472 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 || ||||||||||| |||||||| || | || | | ||||| || ||||||||||||| | Sbjct 4471 CCTGCGAAGATAAGTCTCTGCTGATCAGGCGGGGTCCCTTCTTTGTCTTGAATTTTTTCT 4412 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 || || | || | ||| ||| || || || | ||| | || || || || ||| Sbjct 4411 TTCACCGCTTCAATTGAGTCGGAAGGTTCAACATCTAAAGTGACCGTCTTCCCGGTCAGA 4352 Query 152085 GTCTTCACGAAGACCTGCATT 152105 || || ||| | | ||||||| Sbjct 4351 GTTTTTACGTAAATCTGCATT 4331 >seq9473 Length=1265 Score = 87.8 bits (96), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||||||||| || | |||||| || | | || || ||||| || || || ||| Sbjct 1240 TTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGGAATCCCCTCCTTGTCCTGGATCTTT 1181 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||||| |||| | ||| || ||| || || ||||| || || || || ||| Sbjct 1180 GCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCACATCGAGAGTGATCGTCTTTCCGGTG 1121 Query 152082 AGAGTCTTCACGAAGACCTGCATTTT 152107 |||||||||||||||| ||||||||| Sbjct 1120 AGAGTCTTCACGAAGATCTGCATTTT 1095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151652233468990