Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq10895 123 3e-23 >seq10895 Length=16309 Score = 123 bits (136), Expect = 3e-23 Identities = 385/590 (65%), Gaps = 17/590 (3%) Strand=Plus/Minus Query 23516 AATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCA 23575 |||| ||||| | ||||||||| | |||||||||||| ||||| || || || |||| Sbjct 9529 AATCGCAATGCATGCCTTCATCACGGGAAATCAATTCATTGGAAAAAGTCAACCCGGGCA 9470 Query 23576 TTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCT 23635 |||| |||| ||| || | |||||| || | | ||| | |||||||||||||| || | Sbjct 9469 TTAACCCTCTTTTCTTCAACCAAAAAATGGAACAAAAAGCCCCGGAAAAGAAAATCCCTT 9410 Query 23636 CAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtt 23695 | ||||| |||||||| | | ||| |||| ||| |||| ||||||| Sbjct 9409 CCACAGCGGCAAAGGCGATCAATCGTTCGGCAAAACTTG---GGGAATC---AATCCATC 9356 Query 23696 tttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTT-TCAATTGCTTTTAAGAGA 23754 | | ||||| ||||| | || || | ||| ||||| || | || || Sbjct 9355 TAAGCGCCCAATCCGCCTT-TTTCTTGATGGCTGGAAAGTTCTCAATAGCCTGAAAAAGG 9297 Query 23755 AAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAA 23814 | ||||||| | | || ||| ||| || || || | | || |||| ||| Sbjct 9296 ATGTTTTTTTCCTTTTCGTCCTTTACATAGGTGTCTATCAACAGGGAGTAGGTTTCGGAA 9237 Query 23815 TGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACA 23874 || || || || || ||||| || || ||||| | | || || || |||| || Sbjct 9236 TGGATGTTCTCCATCATTATCTGGAATCCGTAAAAGAACTTGGCCTCCGAATATTGGACT 9177 Query 23875 TCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAA 23934 || || | ||| | | || |||||||| || ||||| ||||| || ||||| || Sbjct 9176 TCGTTCACAAAATTCTCGGCCAAATTTTCATTTACAATCCCATCGGATGCGGCAAAAAAG 9117 Query 23935 GCAAGAACATATTTTATAA---AATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTA 23991 || | | || |||||||| || || || ||| || || | ||||| ||| Sbjct 9116 GCCAAGATATGTTTTATAAAGTAACGTTCGTCGTCACTTAATTTATCGTTCCAGTCAGAT 9057 Query 23992 ATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCAC---GCTTA 24048 | ||| | |||||||| || || | |||||||||| ||| ||| || Sbjct 9056 AAATCCTGATGTAAATCAATCTCCTCGGCGGTCCAAAAACAGGCC---TCACATTTTTTG 9000 Query 24049 TACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCTATC 24098 ||| | ||| | ||| | ||||| || || |||||||| |||||||| Sbjct 8999 TACCATTCCCACAAATCGTGATGTTCAATGGGGAATATTACAAATCTATC 8950 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 23209 ACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAAT 23268 ||||| |||||| || || || | | |||| || ||||| || || |||| || | Sbjct 9839 ACACCGGCTTTTTGGTACTCGGAGACCCTTTTTTCAAAGAAATTGGTTTTCCCCTGTAGT 9780 Query 23269 GATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAAT 23328 || || | |||||||||||||||||||| | || ||||||||| || |||| | | Sbjct 9779 GAAATCATATCCATAAAATCAAATGGATTGGTAGAATTATATACTTTTTCACATTGAAGT 9720 Query 23329 TCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCA 23374 || || ||||| || | ||||||||| | |||||| ||||| Sbjct 9719 TCAACCAATAGCCTGTCCGTTACAAATTCCAAATATTGGGTCATCA 9674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520531786566000