Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq9473 96.9 3e-15 seq56386 86.0 6e-12 seq44056 86.0 6e-12 seq37644 82.4 7e-11 >seq9473 Length=1265 Score = 96.9 bits (106), Expect = 3e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| |||| ||||||||||| |||||||| ||||| ||||| || || | ||| Sbjct 1265 GAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCGGGGGG 1206 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 || | |||||||||| ||| ||| ||| | | | || ||| | |||||| Sbjct 1205 AATCCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCGATAGAGTCAGAGGGCTCCAC 1146 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || | || ||||| || || || || ||||| ||||| |||||||| || Sbjct 1145 ATCGAGAGTGATCGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCATTTT 1095 >seq56386 Length=466 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | || || | ||||||||| || ||| |||||||| ||||| ||||| || Sbjct 338 GCCGCCTCTCAGGCGGAGCACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGA 397 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || | | | || || ||||||||||| || || || |||||||| || || | ||| Sbjct 398 CAGCGTTCTCCCATCCTCAAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGATCAGGGGG 457 Query 41755 AA 41756 || Sbjct 458 AA 459 >seq44056 Length=2137 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 41660 TGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGC 41719 ||||| |||||||||||||| ||||| ||||| || || || | | || | |||||| Sbjct 430 TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTCCTGCCTTCCTGGAGCTGT 371 Query 41720 TTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 ||||| || || ||||||||||| || || | || | || ||||||||| Sbjct 370 TTGCCTGCAAAGATCAGGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTC 321 >seq37644 Length=6317 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||||| ||| || ||||||||||| || ||| | || || || |||||||| ||||| Sbjct 4522 TCCTTCTCAATATTGTAGTCGGAGAGAGTTCGCCCATCCTCAAGTTGCTTGCCTGCGAAG 4463 Query 41732 ATCAGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || | ||| || || ||||| | || || ||||| ||||||| |||| || Sbjct 4462 ATAAGTCTCTGCTGATCAGGCGGGGTCCCT-TCTTTGTCTTGAATTTTTTCTTTCACCGC 4404 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | |||| | || || || | || | ||| || || ||||| || ||||| Sbjct 4403 TTCAATTGAGTCGGAAGGTTCAACATCTAAAGTGACCGTCTTCCCGGTCAGAGTTTTTAC 4344 Query 41851 GAAAATCTGCAT 41862 | |||||||||| Sbjct 4343 GTAAATCTGCAT 4332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461456307828000