Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq46 105 6e-18 >seq46 Length=25720 Score = 105 bits (116), Expect = 6e-18 Identities = 187/271 (69%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 147117 GTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTTAAA 147176 |||||||| || | ||||| ||| || ||||| || ||||| || ||||||||| Sbjct 2859 GTGAATTGTATAGGATTTGCAGCGCTTTGTGTTCTTAAGTAGTAAGCACCAGTTTTTAAA 2918 Query 147177 CCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTT--ATAGGTTGGATTGGCCA 147234 ||||| | ||| |||| ||| || || ||| | |||| |||| | | ||| || | Sbjct 2919 CCCTTCTTCCATCCATAGAAGTGCATAGAAGAT--AGCTTTGCATAGTTGGCATTTGCAA 2976 Query 147235 CAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATGTCCA 147294 | ||| ||| || || || ||| ||||| ||||| | ||||| ||||| || | Sbjct 2977 TATAAATATTTAGAGACTGAGATTGACAAATGTATGGTCCTCTATCTGCCGCCATATCAA 3036 Query 147295 ACACTACTTTTTGTTTAATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTGTGGAA 147354 ||| |||||||| |||||||||| |||| ||| | || | |||| | || | Sbjct 3037 TAACTGCTTTTTGTCTAATTTCCCAGACGGTTTTGTACAGGTCGCGAATATCTCGCGGTA 3096 Query 147355 TTTCATCAATATTTTGTACAGATCCGTTGTT 147385 | ||||||||||| ||| ||| ||||| Sbjct 3097 TAGACTCAATATTTTGAACACTTCCATTGTT 3127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660742631440