Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq211 107 2e-18 seq213 86.0 6e-12 >seq211 Length=153182 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188 || |||| ||| || ||||||||||| || ||||||||||| | || | ||| Sbjct 121360 AAAACTAAATGAAGAGTTGATTCCTTCTGAATATTATAATCAGATAAAGTCCGACCATCC 121419 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || | |||||| || || | || |||| ||| || || || ||||| |||||||||||| Sbjct 121420 TCAAGTTGTTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGAATCCCTTCTTTATCT 121479 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 |||||||| || | ||| | || || || | || ||||| || || | ||| Sbjct 121480 TGAATTTTAGCCTTTACATTTTCAATAGTATCAGATGGTTCAACTTCAAGTGTTATTGTT 121539 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| ||| || |||||||| ||||| Sbjct 121540 TTACCCGTTAAAGTCTTCACAAAAATCTGCAT 121571 >seq213 Length=131909 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || | |||||| |||| ||| | || || ||||| || ||||| || || Sbjct 113574 CCACCACGTAACCTCAAAACTAAATGTAAAGTAGACTCCTTCTGAATATTGTAGTCTGAT 113633 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| || | ||| ||||| || | || || ||||| || || || || Sbjct 113634 AAAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACGTTGTTGATCTGGAGGT 113693 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || ||||| || ||| || | ||| | || || |||| || ||| Sbjct 113694 ATTCCCTCCTTGTCTTGTATCTTTGCCTTTACATTTTCAATTGTATCAGAAGGTTCAACT 113753 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | |||| ||||| || |||| ||||| |||||||||||||| Sbjct 113754 TCTAATGTAATAGTTTTCCCAGTTAAGGTTTTAACAAAAATTTGCAT 113800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001634938920