Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq211 188 6e-43 seq213 143 2e-29 >seq211 Length=153182 Score = 188 bits (208), Expect = 6e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||||||||||||||||||||| || ||||| || || ||||| ||||| | Sbjct 121345 CCACCTCTTAAACGTAAAACTAAATGAAGAGTTGATTCCTTCTGAATATTATAATCAGAT 121404 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | ||| || || ||||| || || | |||||||| || ||| Sbjct 121405 AAAGTCCGACCATCCTCAAGTTGTTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGA 121464 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||||||||||||||| |||||| |||| | ||| ||||| | ||| ||| Sbjct 121465 ATCCCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATAGTATCAGATGGTTCAACT 121524 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | ||||| || |||||||| || ||||| |||||||| Sbjct 121525 TCAAGTGTTATTGTTTTACCCGTTAAAGTCTTCACAAAAATCTGCAT 121571 >seq213 Length=131909 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||||||||| | ||||| || || || |||||||| || | | ||||||| |||| Sbjct 113589 AAAACTAAATGTAAAGTAGACTCCTTCTGAATATTGTAGTCTGATAAAGTTCTGCCATCT 113648 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | |||||| || ||||| || ||||| |||||||| || || || || || || ||| Sbjct 113649 TCAAGTTGCTTTCCAGCAAAGATTAAACGTTGTTGATCTGGAGGTATTCCCTCCTTGTCT 113708 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || ||| |||||| |||| | || ||||| | ||| ||||| | || | ||| Sbjct 113709 TGTATCTTTGCCTTTACATTTTCAATTGTATCAGAAGGTTCAACTTCTAATGTAATAGTT 113768 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| ||||| ||||| || ||||| Sbjct 113769 TTCCCAGTTAAGGTTTTAACAAAAATTTGCAT 113800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277062188889