Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq211 89.7 4e-13 >seq211 Length=153182 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || |||||||||||||| || || ||| ||||| || Sbjct 121571 ATGCAGATTTTTGTGAAGACTTTAACGGGTAAAACAATAACACTTGAAGTTGAACCATCT 121512 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAG-AGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| ||||| || |||| ||||| | | | | ||||| Sbjct 121511 GATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGGATTCCACCT-GATCA 121453 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | || ||||| || |||||| | || ||| | ||| | | |||||||| Sbjct 121452 ACAAAGATTAATTTTTGCTGGGAAACAACTTGAGGATGGTCGGACTTTATCTGATTATAA 121393 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| || ||||| ||||| || | || ||| | ||| |||| || Sbjct 121392 TATTCAGAAGGAATCAACTCTTCATTTAGTTTTACGTTTAAGAGGTGG 121345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425403363859983