Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2 334 5e-86 seq248 282 3e-70 seq1 197 9e-45 seq213 149 4e-30 seq211 132 3e-25 seq247 129 4e-24 seq203 114 8e-20 seq126 107 1e-17 seq199 100 2e-15 seq36 95.1 8e-14 >seq2 Length=183582 Score = 334 bits (370), Expect = 5e-86 Identities = 662/965 (69%), Gaps = 25/965 (3%) Strand=Plus/Plus Query 475318 TGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGA 475377 ||| ||| | ||||| | | ||||||||| | ||| |||| ||||||||||| || Sbjct 105366 TGATGTATCATTACTTACTATTGAAGATGGTATCTTCGAAGTAAAGGCAACAGCTGGTGA 105425 Query 475378 TTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTTGAAGATTT 475437 | ||||||||||||||||||| |||||||||||| | || || ||||| ||||||| Sbjct 105426 TACACATCTTGGTGGTGAAGACTTTGATAATAGATTAGTTGAATTCTGTGTCCAAGATTT 105485 Query 475438 CAAGAGGAAAAATAAAG---TTGATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAG 475494 ||| | || ||| | ||||| | | || ||| || || ||| | | || Sbjct 105486 TAAGCGTAAGAATCGTGGTCTTGATTTAACTACTAATGCCCGTGCTTTGAGAAGATTAAG 105545 Query 475495 AACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGT 475554 ||| ||||||||||| ||| || | |||||||| |||| ||| | || | ||| | Sbjct 105546 AACCCAGTGTGAACGTGCAAAGAGAACACTTTCTTCATCTACACAAGCAACAATCGAATT 105605 Query 475555 TGATTCTCTTTTTGAAGGAATTGATTA--TAATACTCTTATTACAAGGGCTAAATTTGAA 475612 |||||| | || ||||| ||||| || | || ||| || | | || | |||||| Sbjct 105606 GGATTCTTTGTTCGAAGGTATTGACTACTTTGTA-TCT-ATAAGTCGTGCAAGATTTGAG 105663 Query 475613 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGAT 475672 || ||||||||||| || | ||| | | || || || | || | | |||| Sbjct 105664 GAACTTTGTTCTGATTATTTCCGTGGCACATTAGCTCCAGTAGAGAAGGTATTAAAAGAT 105723 Query 475673 TCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATT 475732 ||| | | || || ||| ||||| |||| | ||||| |||||||| | ||| Sbjct 105724 TCTGGAATGGATAAGAGGTCAGTACATGATGTTGTATTAGTAGGTGGTTCAACCCGTATT 105783 Query 475733 CCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTA 475792 ||||| || | || | || | || ||||||||||| | | || ||| | Sbjct 105784 CCAAAGGTACAACAATTAATTCAAGAATTCTTTAATGGTAAGGAACCA--TGCAAGGCAA 105841 Query 475793 --AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTC 475850 ||||| |||||||||||||| ||||| ||||| || |||||||| || ||| ||| Sbjct 105842 TTAATCCAGATGAAGCTGTTGCTTATGGTGCTGCAGTTCAAGCAGCAATCTTAAATGGTG 105901 Query 475851 AATCAGACG--AGAAACTAAATAAT-ATTGTACTTGTTGACGTAACTCCACTTTCATTAG 475907 || ||| | || | || | | ||||| ||| || || ||||||| || |||| Sbjct 105902 AA-CAGTCATCAGTAGTGCAAGATTTATTGTTATTG--GATGTTGCTCCACTATCTTTAG 105958 Query 475908 GTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCAT 475967 || | ||||||| || || ||||||| || |||||||| | |||||| | || ||| Sbjct 105959 GTTTGGAAACAGCAGGTGGTGTTATGACAAAACTTATTGAACGTAATACTACCATTCCA- 106017 Query 475968 GCAAA-AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAA 476026 ||||| ||| | ||||||| | || ||| ||||||| || | |||| || ||| Sbjct 106018 GCAAAGAAAACTCAAGTATTCACAACATATGCTGATAACCAGAGTGGTGTACTTATTCAA 106077 Query 476027 ATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTT 476086 | |||||||||||| | | | || ||||||||| || ||| || | || || | Sbjct 106078 GTATTTGAAGGTGAACGTGCAATGACAAAAGATAATCACTTACTAGGTAAATTCCATTTA 106137 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 || |||||||| || ||||| | || || || ||||||||||| ||||||||||||||| Sbjct 106138 GATGGTATTCCACCAGCTCCACGTGGTGTACCACAAATTGAAGTAACTTTTGATATTGAT 106197 Query 476147 GCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAAC---AAGAGTAAAAAT 476203 |||||||| ||| | ||||| | || ||| || |||| | ||||| | || Sbjct 106198 GCAAATGGCATTTTAAATGTATCAGCAGTTGACAA---GAGTACCGGTAAGAGCAGCAAG 106254 Query 476204 ATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGAT 476263 || || ||||| || || ||| | || | | ||| | ||| ||||||||||| || Sbjct 106255 ATTACGATTACTAATGATAAAGGTCGTTTATCAAAGGAAGATATTGAACGTATGGTTAAT 106314 Query 476264 GAAGC 476268 || || Sbjct 106315 GATGC 106319 Score = 295 bits (326), Expect = 4e-74 Identities = 432/602 (72%), Gaps = 22/602 (4%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 ||||||||||||||||||| || || |||||| || || ||| | ||| | |||| Sbjct 104768 TTGGTATTGATTTAGGAACAACATATTCTTGTGTTGCCGTATGGAAGCATGATGCTGTAG 104827 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| ||| | ||||| || |||||||||||||| ||||| |||||| | |||||||| Sbjct 104828 AAATTATTCCAAATGATCAGGGTAATAGAACAACCCCATCTTATGTTGCATTTACTGATT 104887 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | |||| | | ||||| ||||| ||||| |||| | ||| ||| || | |||||| Sbjct 104888 CCGAACGTTTAATTGGTGATGCAGCTAAGAATCAGGTTGCTCGTAACCCAGAAAATACTG 104947 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | || ||||||||| | || |||||| | || ||||||||| |||| ||| ||| | Sbjct 104948 TATTCGATGCTAAACGTTTAATTGGTAGGAAATTTGATGATCAAGCTGTTCAAAGTGACA 105007 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGT---GGTAAACCATATATAGAAGCAA 474629 || |||||||| || ||||| || | | | ||||||| ||| || | Sbjct 105008 TGACACATTGGCCATTCAAGGTTGCTCGTGGTCCTAAAGATAAACCAATTATTAAA--AT 105065 Query 474630 TAC--ACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 ||| || ||||||||| || |||| | ||| ||||||| | ||||| ||| Sbjct 105066 TACCTACTTAGGTGAAACAAAGGAATTCCATGCTGAAGAAATTTCAGCTATGGTCTTACA 105125 Query 474688 CAAAATGAAACAAACCGCG--AGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAAT 474744 || ||||| | | | |||| || ||||| |||| ||| | |||| ||| | Sbjct 105126 AAAGATGAAGGAGATTTCTGAAGCT--TACCTTGGT-AAGACAGTTAAGAATGCTGTAGT 105182 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||| ||||| || ||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct 105183 TACAGTTCCTGCCTATTTCAATGATTCACAACGTCAAGCTACAAAGGATGCTGGTGCAAT 105242 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||| | || ||| | ||||||||||||||||| ||||| || || | |||||||| Sbjct 105243 TGCTGGTTTGAACGTTATGCGTATTATTAATGAACCTACAGCTGCTGCTATAGCTTATGG 105302 Query 474865 TCTTGATAAGAA---TTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGG 474918 |||||||||||| | ||| ||| |||||| || ||||| |||| |||| || Sbjct 105303 TCTTGATAAGAAAGGTACTG---GTGAAAGAAATGTCTTGATCTTCGATTTAGGTGGTGG 105359 Query 474919 TA 474920 || Sbjct 105360 TA 105361 Score = 104 bits (114), Expect = 2e-16 Identities = 243/359 (68%), Gaps = 12/359 (3%) Strand=Plus/Minus Query 330936 AAAATT-ATATAAAATATGACATGGAGGAAGTGCCATTTTATTAATATCCACTGGATTCC 330994 |||||| | |||| |||||||| || || | |||||| | || || | |||||||| Sbjct 181583 AAAATTGAGATAATATATGACAAGGTGGTAATGCCATATATTTCATTGCAGATGGATTCC 181524 Query 330995 ATAAATTAATAATAATTCTTCTATCTGTCGGATTATTTTTAATTGCTTCGATACAttttt 331054 || | | ||| ||||||||| ||||| || |||| || ||| || | ||| Sbjct 181523 ATGCAGATAAGATATGTCTTCTATCATAAGGATTTTTCTTAAGTGATTCAATTAAATTTG 181464 Query 331055 ttAATTGATCAATTCCTTGCCCGCTGTAATCTTTTTTACAATTT-TCATATGTTGCACCA 331113 ||||||||| | ||||||||| | |||| | | | || | | | |||| |||| | Sbjct 181463 ATAATTGATCTACTCCTTGCCCATTATAAT-TATCATGCATTGTCTTATATTCTGCATTA 181405 Query 331114 AAATATCTCATTTGGAAACCATATCCAGGACCTATATCACCTACATC---ATAATCCAGA 331170 |||| |||| ||| ||||||||| ||||| | ||| | || |||| | ||| Sbjct 181404 AAATGTCTCCATTGAAAACCATATATTGGACCCAAGTCATTCTCTTCTCGATAACCTAGA 181345 Query 331171 CCATTTTTATCTAAAAAATCACGTGATGAATTTTTATCCCAAATATGAACACCGGCTTTT 331230 ||| |||||| ||| | || |||| ||| | |||||||| || || ||| Sbjct 181344 CCAATTTTATTCAAATACTCTTTTGATCCATTACCAGCCCAAATA--AATACTTT-TTTA 181288 Query 331231 TGTAAAAC---ATTAACATCAGTACTGCCTCTTATCATCCACATTAATTCTTCAAATAT 331286 | ||| | |||| ||| ||| ||| |||| | |||||||||||| ||||| || Sbjct 181287 TCTAATAAGTGATTACCATTTGTATCACCTTTTATAAACCACATTAATTCCTCAAAAAT 181229 >seq248 Length=29326 Score = 282 bits (312), Expect = 3e-70 Identities = 394/548 (72%), Gaps = 6/548 (1%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||||||| | || |||||||| ||||| ||| | | ||||||| | ||| Sbjct 16471 ATTGGTATTGATCTTGGTACTACTTATTCATGTGTTGCTATCTATAAAAATGGAAGAGTT 16412 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 |||||||| | ||||| ||||||||||| | ||| ||||||||||| || ||||| ||| Sbjct 16411 GAAATAATACCAAATGATCAAGGTAATAGGATAACTCCATCATATGTCTCATTTACAGAA 16352 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 |||| ||||||||||| |||||||| |||||||| || |||||| | | ||| Sbjct 16351 GATGAAAGGCTTATTGGAGAAGCTGCTAAGAATCAAGCTACAATTAATCCATCTCAGACT 16292 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | ||||||| || ||| | ||||| ||| |||| ||| | || | ||| || Sbjct 16291 TTATTTGATGTAAAGAGACTTATTGGACGTCGTTTTACAGATGACTCTATTCAAAAGGAC 16232 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATA 474631 | || || |||| | | | || ||| ||| ||||| || || ||| | Sbjct 16231 AAAGTTCTTTTACCTTATGAAATTATTAATAAGAATGGCAAACCTTACATTAAAGT--TG 16174 Query 474632 CACGCAGG--TGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | ||| || |||||| || | |||||| | ||||| | ||||| ||| | | Sbjct 16173 CTGTCAAGAATGAGACGAAACAACTTGCCCCGGAAGAGGTTTCTGCTATGGTATTAACTA 16114 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 ||||||| | | || ||| | ||||||||| | ||||| | |||| || ||||| Sbjct 16113 AAATGAAGGAGATTGCTGAGG-CTTATCTTGGAAAGGAAGTTAAACATGCTGTTGTTACT 16055 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||||||||| ||||||||| |||| | ||||| || |||||||| ||| |||||| Sbjct 16054 GTTCCAGCATACTTTAATGATGCTCAGAGACAAGCTACAAAAGATGCAGGAGCTATTGCA 15995 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 ||||| |||||| | ||||| |||||||| || ||||| || || | |||| |||| | Sbjct 15994 GGTCTAAATGTTATTCGTATAATTAATGAGCCTACAGCTGCAGCTATAGCTTTTGGTTTA 15935 Query 474869 GATAAGAA 474876 ||||| || Sbjct 15934 GATAAAAA 15927 Score = 188 bits (208), Expect = 5e-42 Identities = 459/687 (67%), Gaps = 25/687 (4%) Strand=Plus/Minus Query 475601 GCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAA 475660 ||||| ||||| || | | | || || |||||| |||| || || || ||| || | Sbjct 15598 GCTAAGTTTGAGGAATTAAATGCAGACCTATTTAGACAAACTATGGAGCCTGTTAAAAAG 15539 Query 475661 GTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGT 475720 ||| | | |||| | | | | ||||| | || ||||| ||||| | || || ||| Sbjct 15538 GTTTTGAAAGATGCAGATATGAAGAAATCTGATGTACATGAGATTGTCTTAGTTGGTGGT 15479 Query 475721 TCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT-----TTTAATGGTAAAA 475775 || || | ||||| ||||| ||| |||| || | | ||| |||| ||| Sbjct 15478 TCTACTCGTATTCCTAAAATCC----AAT-CTTTAATTAAAGATTTCTTTGATGGGAAAG 15424 Query 475776 AGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 | |||| | | | ||||||||||| ||||| || ||||| |||||||| ||||| | Sbjct 15423 AACCAAATAGAGGAATTAATCCTGATGAGGCTGTAGCTTATGGTGCTGCTGTTCAAGCTG 15364 Query 475836 CTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 |||| | | ||| || | | || | || |||||| | || ||||||| Sbjct 15363 GTATTCTTGCTGGTGAAGGTG----GTAAGGACTTATTATTGT-----TAGATGTAACTC 15313 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 | | | |||||| | || ||||||||||| ||||||| || |||||| ||||||| Sbjct 15312 CTTTAACCTTAGGTATCGAGACAGTTGGAGGAGTTATGACAAAACTTATTCCTAGAAATA 15253 Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTC--CACTTATTCTGATAATCAAACAAC 476013 | | | || | | || || | | |||||| |||| | ||||||||| | | Sbjct 15252 CAGTTGTTCC-TACGAAGAAGGGACA-AATTTTCAGTACTTCTCAAGATAATCAACCCGC 15195 Query 476014 TGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTT-G 476072 ||| || ||| | |||||||||||| | | || ||||||||||| |||| | Sbjct 15194 AGTATTAATACAAGTTTTTGAAGGTGAACGCTCCATGACAAAAGATAATAATTTACTTGG 15135 Query 476073 GAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 ||| ||| ||| | |||||||| || || || ||||| || ||||| || ||||||| Sbjct 15134 GAAATTTGAAT-TAACTGGTATTCCCCCAGCCCCTAGAGGTGTCCCTCAGATAGAAGTTA 15076 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACA 476192 ||||||| |||||| | ||||||||||| | || | |||| ||||| || | | Sbjct 15075 CTTTTGAAATTGATACTGATGGTATTCTTCAAGTCAGTGCTGAAGATAAGGGTACTGGGA 15016 Query 476193 AGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAAC 476252 | | | || || ||||| || || || | | | | || ||||| | ||| ||| Sbjct 15015 AATCTGAGAAAATTACTATCACTAATGATAAAGATCGTCTATCTCAAGAAGATATTGAAC 14956 Query 476253 GTATGGTTGATGAAGCCAAAGAGTTTG 476279 ||||| || | ||||| || | |||| Sbjct 14955 GTATGATTAAAGAAGCTGAACAATTTG 14929 >seq1 Length=119889 Score = 197 bits (218), Expect = 9e-45 Identities = 261/354 (74%), Gaps = 20/354 (6%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 ||||| |||||||||||||||||||||||||||||||||| | | ||||||| ||| Sbjct 112267 GTTTTTGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGCTTCTTTATATTATCCATTT 112326 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATAT-TGCAGATTTTATAACAGAATC 297440 ||||| ||| ||| || | ||||| | |||||||||| ||| ||| Sbjct 112327 AAAAAT----AAAGATTACT---TTAATGAGATTTTTCCTGCAGATTTTGTAAGTGAAGG 112379 Query 297441 AATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAA 297500 | | ||||||||||| |||||||||||||| ||| | || | |||||||| ||||| | Sbjct 112380 ATTGGATCAAACAAGGGGTTGGTTTTATACCTTAATGATTTTATCTACAGCATTATTTGA 112439 Query 297501 CAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAA 297560 || ||||| ||||||||| | ||||||| ||| ||||| ||| | ||||| |||| Sbjct 112440 TAAGCCAGCTTTTAAAAATCTTATTGTTAGTGGACTTGTTTTAGCATCAGATGGTAAAAA 112499 Query 297561 AATGTCAAAAAG---TAAAGGTAATTATCCTGATCCAAAT-ATTTTGATGGATAAATATG 297616 ||||||||| || |||| |||||||| || ||| | | ||| | ||||||||| Sbjct 112500 AATGTCAAAGAGACTTAAA---AATTATCCAGACACAATTGAAGTTG-TCAATAAATATG 112555 Query 297617 GTGCAGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGa 297668 |||| ||| ||||| | |||| | |||| || |||| || || | ||| || Sbjct 112556 GTGCTGATGCTTTAAG--ATTATATCTTATTAATTCACCAGTTGTAAGAGCTGA 112607 Score = 156 bits (172), Expect = 3e-32 Identities = 342/499 (69%), Gaps = 24/499 (5%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 || || || |||||||| || ||| || | |||||||| |||||||||| |||| Sbjct 110806 GACGGTCCACCATTTGCAACCGGATTACCA--CATTATGGTCATATTTTAGCTGGTACTA 110863 Query 295853 TTAAAGATACCATGACTAGATATTTA--ACAATGAATGGTTATCAAGTTAATATGGGAAT 295910 | || |||| || ||| ||||| | |||| || ||||| | | | | | | | Sbjct 110864 TCAAGGATATAATTACTCGATATGCACAACAA--AAAGGTTACTATTGTGAAAGGCGTTT 110921 Query 295911 TGGTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGAT 295966 |||||||||||| ||||| | || ||||| ||| ||| | ||| ||| | || Sbjct 110922 TGGTTGGGATTGTCATGGTTTACCTGTTGAATATGAAATTGAC-----AAATTATTGAAT 110976 Query 295967 ATATCACAAAGAAA-GATTTATTGGAATACGGT-ATTGATCGTCATAATGATATTTGTCG 296024 |||||| ||| | ||| || | |||| || |||||| ||||||| ||||| Sbjct 110977 ATATCAGGTAGAGATGATATAATT-AATATGGGGATTGATAAGTATAATGAGTCATGTCG 111035 Query 296025 TGATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATG 296084 | ||| ||||||| || |||||| || ||| | | || | |||||||||| Sbjct 111036 GGCTATTGTATTAAGATATACTGAAAAGTGGAGGACAACAGTAGAACGTGTTGGAAGATG 111095 Query 296085 GATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTG 296144 ||||||| || ||||||| ||| ||||||||| |||||| || |||| || Sbjct 111096 GATTGATTTTGATAATGATTATCGCACAATGGATCCTTCATTTATGCAAAGTGTTTGGTG 111155 Query 296145 GTCATTTAAACAACTTTATGA-AAAGGAAATGATTTTTGA-AGGTTATAAAGTTATGCCT 296202 | |||||||||| | ||||| ||||| || | | | | || |||| || ||||| Sbjct 111156 GGTATTTAAACAATTATATGATAAAGG--ATTAGTATACAGAGCATATAGGGTAATGCCA 111213 Query 296203 TATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAG 296262 || |||||| ||| | |||||| ||||| ||||||| || || ||||||||||| Sbjct 111214 TACTCTACTATTTGTAGTACACCTTTATCAAATTTTGAAGCCAATTTGAATTATAAAGAT 111273 Query 296263 ATTATTGATCCATCTGTTA 296281 | | ||||||||| ||| Sbjct 111274 GTAAGCGATCCATCTATTA 111292 >seq213 Length=131909 Score = 149 bits (164), Expect = 4e-30 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || || | || ||||||| |||||||||||||||||||||||| || | ||| Sbjct 113618 AATATTGTAGTCTGATAAAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACG 113677 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||||||||| ||||| ||||| ||||||||||| |||||| || ||| |||||| || Sbjct 113678 TTGTTGATCTGGAGGTATTCCCTCCTTGTCTTGTATCTTTGCCTTTACATTTTCAATTGT 113737 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || | ||| | ||||||||||| || || | || ||||| |||||||| Sbjct 113738 ATCAGAAGGTTCAACTTCTAATGTAATAGTTTTCCCAGTTAAGGTTTTAACAAAAATTTG 113797 >seq211 Length=153182 Score = 132 bits (146), Expect = 3e-25 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 480569 ATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTG 480628 |||||| || ||| || || ||||||||||| || ||| | ||| |||||||| Sbjct 121368 ATGAAGAGTTGATTCCTTCTGAATATTATAATCAGATAAAGTCCGACCATCCTCAAGTTG 121427 Query 480629 CTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688 || ||||||||||| | | |||||||||||| ||||| ||||| || |||||||| || Sbjct 121428 TTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGAATCCCTTCTTTATCTTGAATTTT 121487 Query 480689 TTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGT 480748 || ||| |||||||||||||| || | |||||| || || |||||||| || Sbjct 121488 AGCCTTTACATTTTCAATAGTATCAGATGGTTCAACTTCAAGTGTTATTGTTTTACCCGT 121547 Query 480749 GAGAGTCTTAACGAAAATTTG 480769 | |||||| || ||||| || Sbjct 121548 TAAAGTCTTCACAAAAATCTG 121568 >seq247 Length=17068 Score = 129 bits (142), Expect = 4e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 ||||| || || |||||||| ||||| || ||||| | || ||| | | |||||||| Sbjct 11189 GATTTCTCTTCACCAAATATAGCAAAAGAGATGCACGTAGGTCACCTACGTTCTACAATT 11130 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 ||||| || | ||||| | |||| ||||| || |||| |||||||| | |||||| Sbjct 11129 ATTGGGGATACAATTTGTCGTATATTTGAATATTTAGGATATGAAGTACTTCGCATAAAT 11070 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 ||| |||| |||||||||||||||||||| ||| | |||| ||| Sbjct 11069 CATGTTGGAGATTGGGGAACACAATTTGGAATGCTCATTGAATA 11026 >seq203 Length=161817 Score = 114 bits (126), Expect = 8e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 474689 AAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 |||||||||||||| || |||| | |||| ||||| | |||||||| ||| Sbjct 19309 AAAATGAAACAAACAGCAGAAGCATACTTAGGACGTACAGTAAAACAAGCAGTAATAACT 19368 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || || || || ||||||||||||||||| |||||||| || ||||| || | ||| ||| Sbjct 19369 GTGCCTGCTTACTTTAATGATTCTCAACGACAAGCAACAAAGGATGCTGGTAAAATAGCA 19428 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || | |||| ||| | ||||| ||||| ||||| || || || | |||| ||| Sbjct 19429 GGATTAGATGTCTTAAGAATTATAAATGAGCCAACTGCTGCAGCTTTGGCTTTTGG 19484 Score = 95.1 bits (104), Expect = 8e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 290843 GCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCT 290902 || || ||||| ||||||||||||||||| ||||| | ||||| ||||| | | ||| Sbjct 19469 GCAGCAGTTGGCTCATTTATAATTCTTAAGACATCTAATCCTGCTATTTTACCAGCATCC 19410 Query 290903 AAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCtttttcc 290962 ||||| || ||||| | ||||||||| |||||||| || || || || |||| || Sbjct 19409 TTTGTTGCTTGTCGTTGAGAATCATTAAAGTAAGCAGGCACAGTTATTACTGCTTGTTTT 19350 Query 290963 actttctttttcaaataattttctgccatttgttttattt 291002 ||| | | || || |||||| ||||||| |||| Sbjct 19349 ACTGTACGTCCTAAGTATGCTTCTGCTGTTTGTTTCATTT 19310 >seq126 Length=2265 Score = 107 bits (118), Expect = 1e-17 Identities = 254/376 (68%), Gaps = 22/376 (6%) Strand=Plus/Plus Query 269140 GCTCTAGAGTGAGTTTTATCGCCCACCATTTGTTTTAAACGCTGATAATATGTCGGACCA 269199 ||||||| ||| | || || | ||||| |||||||| || |||||||| || || || Sbjct 1451 GCTCTAGCATGAATCTTGTCATCAACCATGTGTTTTAAGCGTTGATAATAGGTTGGGCCT 1510 Query 269200 ATAAATATTTT-GACATGCATTTTTTCTCCCGTCATACCATTTGTCATTGTTTCATTTCC 269258 ||||| ||| ||| ||| | | ||| || ||||| ||| ||||||||| Sbjct 1511 ATAAAAATTCGAGACTCTAATTGTCT-TCCAGTATGCCCATTATACATAACTTCATTTCC 1569 Query 269259 CCATGC--TTCATATCC----GTATGAAAC-TAGTTCATCATTTATTTTATTAATATCTA 269311 || | || | | || | ||| ||| || || || |||| | || | | Sbjct 1570 --ATTCCTTTGAAAACCAGCAGCATGTAACCTATTTGAT-----ATTTCTTCAACAGTGA 1622 Query 269312 CACCTGTAAATGGTGTCGCATCACCATATACTCCTTTAATAGCACATACTTTTCCTAATA 269371 | ||| || ||||| |||||||| | | |||| ||||||||| || || | || Sbjct 1623 CTTTTGTGAAAGGTGTAGCATCACCTTCCATGCCTTCAATAGCACAAGTCTTACCGAGTA 1682 Query 269372 GACATTCAATCAATTGTCCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAATAA 269431 ||||||||| | || ||||| ||||| | | || ||| || |||||| ||||| | Sbjct 1683 TACATTCAATAAGATGCCCAATAGTCATTCTTGAAGGAATAGCATGAGGATTCATAATTA 1742 Query 269432 TATCTGGCACAAGTCCAGATTTAGTAAATGGCATATCTGC---TCTATGAATTTTAAATC 269488 ||||||| || | ||| || |||||||||||||||| | ||||| | ||| | Sbjct 1743 TATCTGGTACTATCCCATCTTGAGTAAATGGCATATCTTCCATTCTAT---ATGTAATCC 1799 Query 269489 CAACTGTACCTTTTTG 269504 ||| ||||||||| || Sbjct 1800 CAATTGTACCTTTCTG 1815 >seq199 Length=54927 Score = 100 bits (110), Expect = 2e-15 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 356436 TCTTACATTTAGTGGTTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAAC 356495 ||| |||||||| |||||||||| |||||||| | |||||||| || | ||| |||| Sbjct 23542 TCTAACATTTAGAAGTTTTCCTTTCAATGGGAATACTCCATAATAGTCACGTCCAACAAT 23483 Query 356496 ATTTAATCCAGACATAGCAA-ATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTAC 356554 | ||| |||| || ||||| ||| ||||| ||||||||||| || || |||| |||| Sbjct 23482 AGATAAGCCAGCCA-AGCAAGATGTCTTAGCCGAATCTCCTTCTGTCAGTATTAGTGTAC 23424 Query 356555 ATTT 356558 |||| Sbjct 23423 ATTT 23420 Score = 100 bits (110), Expect = 2e-15 Identities = 199/284 (70%), Gaps = 22/284 (8%) Strand=Plus/Minus Query 355247 ATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAA 355306 ||||||| |||||||| || | || |||||||| | ||||||||| | |||||||| | Sbjct 24608 ATCCAGTACCAATACCATCAGCACCGTTAACTAAGACCATTGGAATGATTGGTACATAGA 24549 Query 355307 ATACTGGTTCAATCATTTTA---TTATCTT-CAAATTGATGTTGCAATACATCAAAATCA 355362 ||| |||||||| || | | ||||| || || || | |||| |||| ||| Sbjct 24548 ATAAAGGTTCAATTTGTTGACCATCATCTTGCAGATATAT-TAACAATGGATCA---TCA 24493 Query 355363 TGTTGTATGAAAATATATTTAGTTAA--TTGATTGAGTTGTGTGAAGATATATCGTGCA- 355419 || | ||||||||| ||| | | ||| | || ||| || || || || ||| Sbjct 24492 GCTTCTGGGAAAATATAACGAGTCCAAGTAGAT--AATTTTGTAAATATGTAACGGGCAG 24435 Query 355420 --CTTGCATTATCTTTGCCTCCA-CTTAATCTTG-TACCAAATTGACCATTGGGAAGTAA 355475 ||||||| | ||||| || ||| || || |||||||||||||| || | | Sbjct 24434 CACTTGCAT---CCTTGCCACCTTCTT--TCCTGCTACCAAATTGACCACATGGCTGAAG 24380 Query 355476 TAAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTA 355519 ||| || | ||||||||||||||| ||| ||| ||||| |||| Sbjct 24379 TAAGTTCAAATTGTTACTTCCAACAAAATCTTGCGCCATATTTA 24336 >seq36 Length=30644 Score = 95.1 bits (104), Expect = 8e-14 Identities = 107/143 (75%), Gaps = 3/143 (2%) Strand=Plus/Plus Query 629945 TTTTATGGACCTCCTGGTACAGGTAAAACATCTGCAATTTTAGCTATGGGACGAGAAATA 630004 || |||||||||||||| |||||||| |||||||||||| | ||| | | || ||| || Sbjct 3776 TTCTATGGACCTCCTGGGACAGGTAAGACATCTGCAATTCTTGCTCTTTGTCGTGAACTA 3835 Query 630005 TTT---AAAGAACATTTTCCAACGAGAGTAATAGAATTTAATGCCTCTGATGATAGAGGA 630061 ||| || || | ||| || | | | ||| | ||||| |||||||| |||||| Sbjct 3836 TTTGGAAATGATGAATTTAGAAATCGTACATTGGAACTGAATGCATCTGATGAAAGAGGA 3895 Query 630062 ATTAATGCAGTTAGAGAAAAAAT 630084 ||||||| |||| | || ||||| Sbjct 3896 ATTAATGTAGTTCGTGAGAAAAT 3918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268167318125996