Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq213 82.4 6e-11 >seq213 Length=131909 Score = 82.4 bits (90), Expect = 6e-11 Identities = 166/245 (68%), Gaps = 1/245 (0%) Strand=Plus/Minus Query 107538 ATTTATAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACC 107597 |||| ||||| || | ||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct 113817 ATTTGTAAGAC-TTAAGAATGCAAATTTTTGTTAAAACCTTAACTGGGAAAACTATTACA 113759 Query 107598 GTCGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAA 107657 | ||| || || ||||| | | | ||||| |||||| || || || Sbjct 113758 TTAGAAGTTGAACCTTCTGATACAATTGAAAATGTAAAGGCAAAGATACAAGACAAGGAG 113699 Query 107658 GGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAA 107717 || | || ||||| || | | || | ||| || || || || || || | || | Sbjct 113698 GGAATACCTCCAGATCAACAACGTTTAATCTTTGCTGGAAAGCAACTTGAAGATGGCAGA 113639 Query 107718 ACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGA 107777 || | | |||||||| ||||| ||||||||||| || || | || ||||| || || Sbjct 113638 ACTTTATCAGACTACAATATTCAGAAGGAGTCTACTTTACATTTAGTTTTGAGGTTACGT 113579 Query 107778 GGGGG 107782 || || Sbjct 113578 GGTGG 113574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875453416853