Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq213 118 1e-21 >seq213 Length=131909 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||||||||| || |||||||| ||| |||||| ||||| ||||| || | Sbjct 113574 CCACCACGTAACCTCAAAACTAAATGTAAAGTAGACTCCTTCTGAATATTGTAGTCTGAT 113633 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || || || ||||| || ||||| || || || || || || | ||| Sbjct 113634 AAAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACGTTGTTGATCTGGAGGT 113693 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | || | | || || | ||| || Sbjct 113694 ATTCCCTCCTTGTCTTGTATCTTTGCCTTTACATTTTCAATTGTATCAGAAGGTTCAACT 113753 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 || | || || ||||| || || || ||||| ||||| || |||||||| Sbjct 113754 TCTAATGTAATAGTTTTCCCAGTTAAGGTTTTAACAAAAATTTGCATTCT 113803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792039127160