Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq213 129 1e-24 >seq213 Length=131909 Score = 129 bits (142), Expect = 1e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575 ||| || || || || | |||||| || | |||||||| |||||||| || ||||| || Sbjct 113603 AGTAGACTCCTTCTGAATATTGTAGTCTGATAAAGTTCTGCCATCTTCAAGTTGCTTTCC 113662 Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635 ||| ||||| | |||||||| || || || || || ||||||||||| |||||| ||| Sbjct 113663 AGCAAAGATTAAACGTTGTTGATCTGGAGGTATTCCCTCCTTGTCTTGTATCTTTGCCTT 113722 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| || || || || | ||| || ||||| || || || || || || || || Sbjct 113723 TACATTTTCAATTGTATCAGAAGGTTCAACTTCTAATGTAATAGTTTTCCCAGTTAAGGT 113782 Query 225696 TTTTATGAACACTTGCATT 225714 ||| | || | ||||||| Sbjct 113783 TTTAACAAAAATTTGCATT 113801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192526967632238