Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq431 113 3e-20 seq581 96.9 2e-15 >seq431 Length=1763 Score = 113 bits (124), Expect = 3e-20 Identities = 175/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 21811 ATATTTATAAGTAATAGTGCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCA 21870 |||||||| |||| | | | ||||||||| ||| ||||||| ||||| || ||||| | Sbjct 360 ATATTTATTTGTAAGACTTAAGAATGCAAATTTTTGTTAAAACCTTAACTGGGAAAACTA 301 Query 21871 TTACCGTGGAAACGGAAGCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATA 21930 |||| | ||| ||| | | || || | | || | ||| ||| || || | Sbjct 300 TTACATTAGAAGTTGAACCTTCTGATACAATTGAAAATGTAAAGGCAAAGATACAAGACA 241 Query 21931 AAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATT 21990 | ||||| ||||| | | ||||| | | ||||||||||| || ||||| |||||| Sbjct 240 AGGAGGGAATACCTCCAGATCAACAACGTTTAATCTTTGCTGGAAAGCAACTTGAAGATG 181 Query 21991 TAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTT 22050 | |||| | | || ||||||||||||||||| |||||| | ||| | || || | | Sbjct 180 GCAGAACTTTATCAGACTACAATATTCAGAAGGAGTCTACTTTACATTTAGTTTTGAGGT 121 Query 22051 TACGAGGAGG 22060 |||| || || Sbjct 120 TACGTGGTGG 111 >seq581 Length=7318 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 7/230 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || |||||||| ||||| || || | ||| ||| | | Sbjct 1400 ATGCAGATTTTTGTGAAGACTTTAACGGGTAAAACAATAACACTTGAAGTTGAACCATCT 1341 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | || | ||| |||||| |||||||| || | ||||| | Sbjct 1340 GATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGGATTCCACCTG---AT 1284 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||| | || |||||||| |||||||| || ||| ||| | | ||||| Sbjct 1283 CAACAAAGATTAATTTTTGCTGGGAAACAACTTGAGGATGGTCGGACTTTATCTGATTAT 1224 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||||||||| || |||||| | || ||||||||| |||| || Sbjct 1223 AATATTCAGAAGGAATCAAC-CTTCATTTAGTTTTACGTTTAAGAGGTGG 1175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358118523639052