Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq431 120 3e-22 seq581 95.1 1e-14 >seq431 Length=1763 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211 || ||| ||||||| |||||||||||||||| ||||| || || ||||| ||||| || Sbjct 107 AACACCACCACGTAACCTCAAAACTAAATGTAAAGTAGACTCCTTCTGAATATTGTAGTC 166 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | ||| | |||||||||||| || ||||| |||| | ||| ||||| || || Sbjct 167 TGATAAAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACGTTGTTGATCTGG 226 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||| || || || ||||| |||||| |||| | ||||| || || | | ||| Sbjct 227 AGGTATTCCCTCCTTGTCTTGTATCTTTGCCTTTACATTTTCAATTGTATCAGAAGGTTC 286 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || || | ||||| |||||||| ||||| Sbjct 287 AACTTCTAATGTAATAGTTTTCCCAGTTAAGGTTTTAACAAAAATTTGCAT 337 >seq581 Length=7318 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 114171 AAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCT 114230 ||||||||||| | || ||||| || ||||| || ||||| | ||| ||| ||| Sbjct 1190 AAAACTAAATGAAG-GTTGATTCCTTCTGAATATTATAATCAGATAAAGTCCGACCATCC 1248 Query 114231 TCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCG 114290 ||||||||||| ||||| | || | | ||||| || || ||||| |||||||| || Sbjct 1249 TCAAGTTGTTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGAATCCCTTCTTTATCT 1308 Query 114291 GCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTT 114350 ||| || |||| | ||||| || || | | ||| || || | || | ||| Sbjct 1309 TGAATTTTAGCCTTTACATTTTCAATAGTATCAGATGGTTCAACTTCAAGTGTTATTGTT 1368 Query 114351 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || | ||| || |||||||||||||| Sbjct 1369 TTACCCGTTAAAGTCTTCACAAAAATCTGCAT 1400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420127036882056