Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq581 95.1 3e-14 >seq581 Length=7318 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || |||||||| || | | || || || || || | |||||| || || || Sbjct 1209 TTCCTTCTGAATATTATAATCAGATAAAGTCCGACCATCCTCAAGTTGTTTCCCAGCAAA 1268 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || | | |||||| | ||| || ||||||||||| || ||||| || || || || Sbjct 1269 AATTAATCTTTGTTGATCAGGTGGAATCCCTTCTTTATCTTGAATTTTAGCCTTTACATT 1328 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| ||| | ||| ||||| || || || || || || || | |||||| || Sbjct 1329 TTCAATAGTATCAGATGGTTCAACTTCAAGTGTTATTGTTTTACCCGTTAAAGTCTTCAC 1388 Query 288462 GAATATCTGCATTAT 288476 || |||||||| || Sbjct 1389 AAAAATCTGCATAAT 1403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179632665604964