Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1254 297 2e-74 seq1188 219 3e-51 seq1246 192 5e-43 seq581 134 1e-25 seq62 129 5e-24 seq854 127 2e-23 seq431 123 2e-22 seq1015 105 5e-17 seq1326 104 2e-16 seq323 91.5 1e-12 >seq1254 Length=47508 Score = 297 bits (328), Expect = 2e-74 Identities = 576/840 (69%), Gaps = 23/840 (3%) Strand=Plus/Plus Query 551757 GAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGAT 551816 ||||||||| |||| ||| || || ||| ||| | ||||||||||| ||||| Sbjct 3258 GAAGATGGTATCTTCGAAGTAAAGGCAACAGCTGGTGATACACATCTTGGTGGTGAAGAC 3317 Query 551817 TTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAG---TT 551873 |||||||||||| | || || ||||| |||||||||| || || || | || Sbjct 3318 TTTGATAATAGATTAGTTGAATTCTGTGTCCAAGATTTTAAGCGTAAGAATCGTGGTCTT 3377 Query 551874 GATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAA 551933 ||| || |||| |||| ||| | | | ||||||| || ||| | || || Sbjct 3378 GATTTAACTACTAATGCCCGTGCTTTGAGAAGATTAAGAACCCAGTGTGAACGTGCAAAG 3437 Query 551934 CGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATT 551993 || | ||||| || ||| ||| | || || ||| | ||||| || || || || ||| Sbjct 3438 AGAACACTTTCTTCATCTACACAAGCAACAATCGAATTGGATTCTTTGTTCGAAGGTATT 3497 Query 551994 GATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGA 552053 || || | |||| | || | |||||| || ||||||||||| || | Sbjct 3498 GACTACTTTGTATCTATAAGTCGTGCAAGATTTGAGGAACTTTGTTCTGATTATTTCCGT 3557 Query 552054 AAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTA 552113 ||| | | |||||||| | || |||| |||||| || ||||| |||| Sbjct 3558 GGCACATTAGCTCCAGTAGAGAAGGTATTAAAAGATTCTGGAATGGATAAGAGGTCAGTA 3617 Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGT 552173 ||||| |||| | || ||||| || || | ||||| || | | || |||| | Sbjct 3618 CATGATGTTGTATTAGTAGGTGGTTCAACCCGTATTCCAAAGGTACAACAA---TTAA-T 3673 Query 552174 TC-----TTATTTCAATGGTAAAAAATTAAATGAAAGTG--TTAATCCAGATGAGGCTGT 552226 || || ||| |||||||| || | || ||| ||||||||||||| ||||| Sbjct 3674 TCAAGAATTCTTT-AATGGTAAGGAACCA--TGCAAGGCAATTAATCCAGATGAAGCTGT 3730 Query 552227 TGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA-ACTGATGAAAAACTAC 552285 ||| |||||||| ||| |||||||||| || | ||| || | | || | | | | Sbjct 3731 TGCTTATGGTGCTGCAGTTCAAGCAGCAATCTTAAATGGTGAACAGTCAT-CAGTAGTGC 3789 Query 552286 AAAA--TATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGG 552343 || | |||||| ||| |||||| |||| |||||| | ||||| ||||||| || || Sbjct 3790 AAGATTTATTGTTATTG--GATGTTGCTCCACTATCTTTAGGTTTGGAAACAGCAGGTGG 3847 Query 552344 TATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATT 552403 | ||||||| || ||||| || | |||||||| ||||| || ||| ||| ||||| Sbjct 3848 TGTTATGACAAAACTTATTGAACGTAATACTACCATTCCAGCAAAGAAAACTCAAGTATT 3907 Query 552404 TTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAA 552463 | || ||| | ||||| || | || ||| |||||| | |||||||| ||| | Sbjct 3908 CACAACATATGCTGATAACCAGAGTGGTGTACTTATTCAAGTATTTGAAGGTGAACGTGC 3967 Query 552464 ATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCC 552523 | | || ||||||||| | ||| |||| || ||||||| |||||||| || ||||| Sbjct 3968 AATGACAAAAGATAATCACTTACTAGGTAAATTCCATTTAGATGGTATTCCACCAGCTCC 4027 Query 552524 TCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 ||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 4028 ACGTGGTGTACCACAAATTGAAGTAACTTTTGATATTGATGCAAATGGCATTTTAAATGT 4087 Score = 284 bits (314), Expect = 1e-70 Identities = 399/555 (72%), Gaps = 15/555 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| ||||||||||| |||||| |||||||| || ||| | ||| | Sbjct 2633 AGCTGTTGGTATTGATTTAGGAACAACATATTCTTGTGTTGCCGTATGGAAGCATGATGC 2692 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||||||| | |||||||| ||||| ||||| || |||||||||||| | || || Sbjct 2693 TGTAGAAATTATTCCAAATGATCAGGGTAATAGAACAACCCCATCTTATGTTGCATTTAC 2752 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || | |||| |||| ||||||||||||| || |||| | || |||| || || Sbjct 2753 TGATTCCGAACGTTTAATTGGTGATGCAGCTAAGAATCAGGTTGCTCGTAACCCAGAAAA 2812 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 |||| | || |||||||||||||||||||| || | ||| ||||| ||||||| Sbjct 2813 TACTGTATTCGATGCTAAACGTTTAATTGGTAGGAAATTTGATGATCAAGCTGTTCAAAG 2872 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCT---GGAAAACCTTATATTGA 550287 || |||| |||||||| ||| | ||| | || | || | ||||| |||| | Sbjct 2873 TGACATGACACATTGGCCATTCAAGGTTGCTCGTGGTCCTAAAGATAAACCAATTATTAA 2932 Query 550288 AGCTACTCATGAAGGATCTGTTAAACA----ATTTTCA-CCAGAACAAATTTCATCTATG 550342 | ||| | || || ||||| | || || | ||| |||||||| ||||| Sbjct 2933 AATTACCTACTTAG-----GTGAAACAAAGGAATTCCATGCTGAAGAAATTTCAGCTATG 2987 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGC 550401 || ||| || ||||| | | | |||| ||||| |||| ||||| | |||| Sbjct 2988 GTCTTACAAAAGATGAAGGAGATTTCTGAAGCTTACCTTGGT-AAGACAGTTAAGAATGC 3046 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 ||| | || || || || ||||| ||||| ||||||||||||||||| || |||||||| Sbjct 3047 TGTAGTTACAGTTCCTGCCTATTTCAATGATTCACAACGTCAAGCTACAAAGGATGCTGG 3106 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 |||||||| | || ||| | |||||||| ||||||||||| |||||||| | || Sbjct 3107 TGCAATTGCTGGTTTGAACGTTATGCGTATTATTAATGAACCTACAGCTGCTGCTATAGC 3166 Query 550522 ATATGGACTTGATAA 550536 ||||| |||||||| Sbjct 3167 TTATGGTCTTGATAA 3181 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 361701 CAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTC 361760 ||||||||||||||| | ||||||||| ||||| ||||| || ||||| || | | Sbjct 3177 CAAGACCATAAGCTATAGCAGCAGCTGTAGGTTCATTAATAATACGCATAACGTTCAAAC 3118 Query 361761 CCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAA 361820 | || ||| ||||| || ||||||||||||| |||||| ||||| ||||||| Sbjct 3117 CAGCAATTGCACCAGCATCCTTTGTAGCTTGACGTTGTGAATCATTGAAATAGGCAGGAA 3058 Query 361821 CAGTAATCACTGCTTTTTCAACT 361843 | |||| || || || | |||| Sbjct 3057 CTGTAACTACAGCATTCTTAACT 3035 >seq1188 Length=9750 Score = 219 bits (242), Expect = 3e-51 Identities = 388/562 (69%), Gaps = 19/562 (3%) Strand=Plus/Minus Query 552042 GATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGAT 552101 || || |||||| |||| || || || || || | ||||| | |||| || | || | Sbjct 630 GACCTATTTAGACAAACTATGGAGCCTGTTAAAAAGGTTTTGAAAGATGCAGATATGAAG 571 Query 552102 AAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGC 552161 ||||| | |||||||| ||||| | |||||||| ||||| | ||||||||||| | Sbjct 570 AAATCTGATGTACATGAGATTGTCTTAGTTGGTGGTTCTACTCGTATTCCTAAAATCC-- 513 Query 552162 GAAATGTTAAGTTCTTATTTCA---ATGGTAAAAAATTAAATGAAAGTGTTAATCCAGAT 552218 || |||| | ||||| |||| ||| || |||| | | ||||||| ||| Sbjct 512 -AATCTTTAATTAAAGATTTCTTTGATGGGAAAGAACCAAATAGAGGAATTAATCCTGAT 454 Query 552219 GAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAA 552278 |||||||| || |||||||| || ||||||| | ||||||| |||| || || | Sbjct 453 GAGGCTGTAGCTTATGGTGCTGCTGTTCAAGCTGGTATTCTTGCTGGTGAAGGTGGT--- 397 Query 552279 AAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTT 552338 || || | |||||| ||||||| |||||| || | | ||| | || |||||| Sbjct 396 -AAGGACTTATTATTGT-----TAGATGTAACTCCTTTAACCTTAGGTATCGAGACAGTT 343 Query 552339 GGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGT 552398 ||||| ||||||| || ||||| ||||||||| | ||||| || || | Sbjct 342 GGAGGAGTTATGACAAAACTTATTCCTAGAAATACAGTTGTTCCTACGAAGAAGGGACAA 283 Query 552399 GTATTTTC--TACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAG 552456 |||||| ||| | | |||||||||| | || || ||| ||| |||||||||| | Sbjct 282 --ATTTTCAGTACTTCTCAAGATAATCAACCCGCAGTATTAATACAAGTTTTTGAAGGTG 225 Query 552457 AAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTC 552516 || | | || |||||||||||| |||||| | ||| | ||| |||||||| | Sbjct 224 AACGCTCCATGACAAAAGATAATAATTTACTTGGGAAATTTGAATTAACTGGTATTCCCC 165 Query 552517 CTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTT 552576 | || ||| | || || || || || ||||||||||| || || ||| | |||| ||| Sbjct 164 CAGCCCCTAGAGGTGTCCCTCAGATAGAAGTTACTTTTGAAATTGATACTGATGGTATTC 105 Query 552577 TGAATGTGACTGCTTGTGATAA 552598 | | || | |||| ||||| Sbjct 104 TTCAAGTCAGTGCTGAAGATAA 83 Score = 205 bits (226), Expect = 7e-47 Identities = 384/559 (69%), Gaps = 9/559 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| ||||| ||| | || || || ||| ||||||| | | | ||||||| | Sbjct 1530 AGTTATTGGTATTGATCTTGGTACTACTTATTCATGTGTTGCTATCTATAAAAATGGAAG 1471 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||| || | |||||||||||||| || | |||||||| ||||| || || || Sbjct 1470 AGTTGAAATAATACCAAATGATCAAGGTAATAGGATAACTCCATCATATGTCTCATTTAC 1411 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| |||| | |||| || || || || ||||||| || |||||| | | Sbjct 1410 AGAAGATGAAAGGCTTATTGGAGAAGCTGCTAAGAATCAAGCTACAATTAATCCATCTCA 1351 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | ||||||| || | | |||||| | |||||| ||| || |||| Sbjct 1350 GACTTTATTTGATGTAAAGAGACTTATTGGACGTCGTTTTACAGATGACTCTATTCAAAA 1291 Query 550231 AGATATGAAG--CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 || | ||| | || |||| ||||| ||||| ||| |||||||| ||| || Sbjct 1290 GGACA--AAGTTCTTTTACCTTATGAAATTATTAATAAGAATGGCAAACCTTACATTAAA 1233 Query 550289 GCTAC--TCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 | | | ||| ||| || | |||||| | | || ||| | |||| ||||||| | Sbjct 1232 GTTGCTGTCAAGAATGAGACG--AAACAA-CTGCCCCGGAAGAGGTTTCTGCTATGGTAT 1176 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 ||| |||||||| | | || |||| | |||| | ||||||| |||| || Sbjct 1175 TAACTAAAATGAAGGAGATTGCTGAGGCTTATCTTGGAAAGGAAGTTAAACATGCTGTTG 1116 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | ||||| |||||||| |||||||| | || | |||||||| |||||||| ||| || Sbjct 1115 TTACTGTTCCAGCATACTTTAATGATGCTCAGAGACAAGCTACAAAAGATGCAGGAGCTA 1056 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 |||| || || |||||| ||||||| || ||||| ||||| ||||| || | || | || Sbjct 1055 TTGCAGGTCTAAATGTTATTCGTATAATTAATGAGCCTACAGCTGCAGCTATAGCTTTTG 996 Query 550527 GACTTGATAAACATAATGA 550545 | | |||||| | | ||| Sbjct 995 GTTTAGATAAAAAGAGTGA 977 Score = 123 bits (136), Expect = 2e-22 Identities = 210/300 (70%), Gaps = 17/300 (6%) Strand=Plus/Plus Query 361546 ATCTATATCTTCACCACCTAAATGTGTACTACCGCTAACTGCTA-ATGTTCTAAATAAGC 361604 ||| | ||||||||| || ||||| ||| ||| ||| ||| | | ||| ||||| | Sbjct 850 ATCAAAATCTTCACCTCCCAAATGAGTATCACCACTAGTTGCAACAACTTC-AAATACTC 908 Query 361605 CATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAA 361664 |||||| |||| | | ||| ||||||| | ||| || |||| |||||||| | | || Sbjct 909 CATTATCAATAGTTAAAAGAGAAACATCAAATGTACCACCACCCAAATCATAAACCAAAA 968 Query 361665 TATTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCAG 361724 || || || | | | || |||| || || |||| |||||| | |||| Sbjct 969 TAGTC------TTCTCACTCTT------TTTA--TCTAA-ACCAAAAGCTATAGCTGCAG 1013 Query 361725 CTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAG 361784 |||| || || |||||||| ||||||||| || || || || | ||||||| | Sbjct 1014 CTGTAGGCTCATTAATTATACGAATAACATTTAGACCTGCAATAGCTCCTGCATCTTTTG 1073 Query 361785 TGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTTCAACTT 361844 | ||||| | || ||||||||||| ||||| |||||||||| || || | || ||||| Sbjct 1074 TAGCTTGTCTCTGAGCATCATTAAAGTATGCTGGAACAGTAACAACAGCATGTTTAACTT 1133 >seq1246 Length=36248 Score = 192 bits (212), Expect = 5e-43 Identities = 265/367 (72%), Gaps = 18/367 (5%) Strand=Plus/Plus Query 368793 AGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATT 368852 |||||| ||||| |||||||||||||||||||||||||||| | || |||||||||| Sbjct 27368 AGTTTTTGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGCTTCTTTATATTATCCATT 27427 Query 368853 TGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATC 368912 | | || | | |||||| || | ||| || | || |||||||||| ||| Sbjct 27428 TAAAAATAAAGATTACTTTAATGA-GAT-----TTTTCCTGCAGATTTTGTAAGTGAAGG 27481 Query 368913 AATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGA 368972 | | ||||||||| | ||||||||||||||| || | | ||||| ||||| | || || Sbjct 27482 ATTGGATCAAACAAGGGGTTGGTTTTATACCTTAATGATTTTATCTACAGCATTATTTGA 27541 Query 368973 TAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGGTCAAAA 369032 ||| || |||||||||||| | || || | ||| ||||| ||||| |||||| |||| Sbjct 27542 TAAGCCAGCTTTTAAAAATCTTATTGTTAGTGGACTTGTTTTAGCATCAGATGGTAAAAA 27601 Query 369033 GATGTCAAAAAG---TAAGGGTAATTATTCCGATCCTAATATTTTAATTG---ATAAATT 369086 |||||||| || ||| |||||| | || | ||| | ||| |||||| Sbjct 27602 AATGTCAAAGAGACTTAA---AAATTATCCAGA---CACAATTGAAGTTGTCAATAAATA 27655 Query 369087 TGGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAATCTAT 369146 |||||||||| |||| |||||||| || | ||||| || |||| ||| || || | Sbjct 27656 TGGTGCTGATGCTTTAAGATTATATCTTATTAATTCACCAGTTGTAAGAGCTGAGACTTT 27715 Query 369147 TAAATTT 369153 | |||| Sbjct 27716 AAGATTT 27722 Score = 120 bits (132), Expect = 2e-21 Identities = 330/493 (67%), Gaps = 12/493 (2%) Strand=Plus/Plus Query 367267 GATGGACCTCCATTTGCCACAGG--TACAATGCATTATGGTCATATTTTAGTATCATCTA 367324 || || || |||||||| || || ||| | ||||||||||||||||||| ||| Sbjct 25908 GACGGTCCACCATTTGCAACCGGATTACCA--CATTATGGTCATATTTTAGCTGGTACTA 25965 Query 367325 TTAAAGACACCATAATTAGATATTTT-ACCATGAAGGGTTACAAAGTTGATAGAAGAAAT 367383 | || || | || | | ||||| | || |||| |||| | ||| || | | Sbjct 25966 TCAAGGATATAATTACTCGATATGCACAACAAAAAGG-TTACTATTGTGAAAGGCGTTTT 26024 Query 367384 TCTTGGGATTGTCATGGAGTTCCAATTGAAATGTTAGCTAAAAAAGTAATCGGATACACA 367443 ||||||||||||||| | || ||||| | | | | | || | || | ||| | Sbjct 26025 GGTTGGGATTGTCATGGTTTACCTGTTGAA-TATGAAATTGACAAATTATTGAATATATC 26083 Query 367444 ACAAAGAAAGAATTATATGATTATGGA-ATTAATAATCATAATGATATTTGTCGTAATTT 367502 | ||| | || || | ||||| ||| |||| ||||||| ||||| | | Sbjct 26084 AGGTAGAGATGATATAATTAATATGGGGATTGATAAGTATAATGAGTCATGTCGGGCTAT 26143 Query 367503 GGTTTTAAAATGTGCTGATCGCTGGTAT-CAAGATTTTGAACGTATTGGAAGATGGATTG 367561 || |||| || | |||| ||| ||| | | |||||| ||||||||||||||| Sbjct 26144 TGTATTAAGATATACTGAAAAGTGGAGGACAACAGTA-GAACGTGTTGGAAGATGGATTG 26202 Query 367562 ACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATTTGGGCAT 367621 | | | ||||| ||| ||||||||| || || ||| || |||| |||| || Sbjct 26203 ATTTTGATAATGATTATCGCACAATGGATCCTTCATTTATGCAAAGTGTTTGGTGGGTAT 26262 Query 367622 TTAAACAATTATACGAACGCGGTATGATTTTTGA-AGGTTATAAAGTAATGCCATATTCA 367680 ||||||||||||| || || || | | | | || |||| ||||||||||| || Sbjct 26263 TTAAACAATTATATGATAAAGG-ATTAGTATACAGAGCATATAGGGTAATGCCATACTCT 26321 Query 367681 ACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAACAAAATTATCGAGAAGTAGTT 367740 ||| ||||| ||| |||| ||| ||||||||||||| |||||| ||| ||| Sbjct 26322 ACTATTTGTAGTACACCTTTATCAAATTTTGAAGCCAATTTGAATTATAAAGATGTAAGC 26381 Query 367741 GATCCATCGATTA 367753 |||||||| |||| Sbjct 26382 GATCCATCTATTA 26394 >seq581 Length=7318 Score = 134 bits (148), Expect = 1e-25 Identities = 157/207 (76%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 563271 ATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG 563330 ||||||| | || ||| | |||||| ||||||| || ||| | ||| |||||||| Sbjct 1198 ATGAAGGTTGATTCCTTCTG-AATATTATAATCAGATAAAGTCCGACCATCCTCAAGTTG 1256 Query 563331 TTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390 ||| || |||||||| | |||||| |||||||| ||||| |||||||||||||||||||| Sbjct 1257 TTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGAATCCCTTCTTTATCTTGAATTTT 1316 Query 563391 TTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCA 563448 ||||| ||||| ||||||| || || || ||| || || | |||||||| Sbjct 1317 AGCCTTTACATTTTCAATAGTATCAG-ATG-GTTCAACTTCAAGTGTTATTGTTTTACCC 1374 Query 563449 GTAAGAGTTTTAACGAAAATTTGCATA 563475 || | ||| || || ||||| |||||| Sbjct 1375 GTTAAAGTCTTCACAAAAATCTGCATA 1401 >seq62 Length=14813 Score = 129 bits (142), Expect = 5e-24 Identities = 340/512 (66%), Gaps = 43/512 (8%) Strand=Plus/Minus Query 430220 TCAATATGAAATTCAGTTGAATATATATTCGCTAATTTTGCTCCGAATCCATTTTTACCA 430279 |||| | ||||||||||||| ||||||| | ||| || || || ||||||||| |||| Sbjct 7292 TCAACACAAAATTCAGTTGAAAATATATTTGTTAACTTAGCACCAAATCCATTTCTACCT 7233 Query 430280 CCAACAAtttttttttCACCTTTATCATAATTAGTGGATGTTAATAGTTCTCCAAAAATC 430339 || | | | | |||| | |||||||||| ||||||| || | ||||| || Sbjct 7232 CCTGTGACTCTATCTTCATTATCATCATAATTATCTGATGTTAGTAAGTGGCCAAATATT 7173 Query 430340 ATCGATGGTACCATGATTTTATGTTCTTTATGCTCGACGACATCAATACCATCACCATTA 430399 | |||||| | | || ||||||||| | ||| ||| ||||| |||| | Sbjct 7172 AATTCTGGTACATATACATCATATTCTTTATGTATTTCAACAGGAATCCCATCTCCATCA 7113 Query 430400 TTCCAAACACTAATT-TCTCCAGATTCTTCATTGATGTCGACTTTTAT-------CAT-- 430449 || ||| ||||||| ||| |||||| ||| || || |||||||| ||| Sbjct 7112 TTAAAAATACTAATTCTCTTATTATTCTT-ATTAATATCAACTTTTATACAGGTACATCT 7054 Query 430450 ---ATTA--CATGATTTGCATCT-TTTA---CTATGATCCGCTGAATTTACAAGAACTTC 430500 |||| ||| ||| |||| | || || ||| || | |||||| | || ||| Sbjct 7053 TTCATTATTCATCATTGAGATCTCTCTAGCCTTAACATCTGCGGCATTTACCAAAATTTC 6994 Query 430501 ATCATATATTTTATAAAGTCCTGGTACATAAGATATTTCTTTAAAAATTATTTGCGCATC 430560 |||| |||| || || | |||||| |||||| |||| |||| ||| Sbjct 6993 ATCAAATATCTTGTATAATCCTGGAACATAATTTATTAATTTA-----TAT--------- 6948 Query 430561 ACCCTCTTTAAATTTATT--ATTATATATCCACATATTACATGTT--TTATCTTCTATAC 430616 ||| |||| ||||||| || | | ||||| | | || | | || |||||||| Sbjct 6947 ACCATCTTATTATTTATTTCATCCCAAACCCACAAACT--TTGCTCATGATATTCTATAC 6890 Query 430617 TACCTATATAGGTATCGGGTGAATGTAATATATGTTCATGAAGAttctttttttgatatt 430676 |||||||||| ||||| || ||| ||||||||| || | ||||||||||| Sbjct 6889 TACCTATATATGTATCAGGACGCAATAAAATATGTTCAATTTGAGTTTTTTTTTGATAAC 6830 Query 430677 tttcttcgattgtcttttcagaactttttttc 430708 |||||| | ||||| || ||||||||| Sbjct 6829 GTTCTTCAACCGTCTT---AGCCCTTTTTTTC 6801 >seq854 Length=22821 Score = 127 bits (140), Expect = 2e-23 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723 ||||||| |||||||||||||| || ||||| ||||| | || || | |||||||| | Sbjct 6279 TTGATTTCTCTTCACCAAATATAGCAAAAGAGATGCACGTAGGTCACCTACGTTCTACAA 6220 Query 930724 TTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTCA 930783 ||||||| || | | ||| | ||| |||||||| ||| | |||| | ||| | | Sbjct 6219 TTATTGGGGATACAATTTGTCGTATATTTGAATATTTAGGATATGAAGTACTTCGCATAA 6160 Query 930784 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTATATA 930833 ||||| |||| |||||||||||||||||||| ||| | |||| ||| || Sbjct 6159 ATCATGTTGGAGATTGGGGAACACAATTTGGAATGCTCATTGAATATTTA 6110 >seq431 Length=1763 Score = 123 bits (136), Expect = 2e-22 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| || | || |||||| |||||||||||| ||||| ||||| || | | Sbjct 155 AATATTGTAGTCTGATAAAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACG 214 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||| ||||| ||||| ||||| || || ||||| || ||| ||||| |||||||| Sbjct 215 TTGTTGATCTGGAGGTATTCCCTCCTTGTCTTGTATCTTTGCCTTTACATTTTCAATTGT 274 Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 ||||| | | ||| | |||| |||||| ||||| | |||||||| |||||||| Sbjct 275 ATCAGAAGGTTCAACTTCTAATGTAATAGTTTTCCCAGTTAAGGTTTTAACAAAAATTTG 334 Query 563472 CAT 563474 ||| Sbjct 335 CAT 337 >seq1015 Length=15056 Score = 105 bits (116), Expect = 5e-17 Identities = 249/376 (66%), Gaps = 20/376 (5%) Strand=Plus/Minus Query 1047046 ATTGCTGATTGGTTTGCACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGA 1047105 ||||||||||||||||||| ||||| |||| ||||| |||||| |||| || || | Sbjct 12180 ATTGCTGATTGGTTTGCACTTTTGAATAATAAGATGGGTGGTGATCTAGAGAAGATACAA 12121 Query 1047106 GATGTGGGTAAATATTTCATTGAAGTATTTAAAGCATGTGGTATTAATATGTCTGGCACT 1047165 ||| || || || || ||||| || | | || |||||| ||||| || Sbjct 12120 ACTGTAGGGAAGTACTTTATTGAGGTTTGGAGGGCTACTGGTATGGATATGACTAATGTG 12061 Query 1047166 AAATTTATCTGGGCTAGTGAATTTTTTAATGATAATGCTACAAAATATTTTGAAAGAATG 1047225 | |||| | |||||| ||| | | | ||||| | || | | || ||| | Sbjct 12060 AGATTTTTGTGGGCTTCTGATGAGATAAGTAATAATTCAACTTACTGGCTT---AGAGTT 12004 Query 1047226 TTACATATTGCTA----ATCAGACATCTTTAGCACGTGCTAAAAGATGTTGTCAAATTAT 1047281 || |||| ||| || | || | ||| | |||||||||||| |||||||| Sbjct 12003 ATAGATATATCTAGAAAATTCAATATATCTAGGAT----TAAAAGATGTTGCCAAATTAT 11948 Query 1047282 GGGACGTAGAGAAGGTGATGAATTATCTTCGTCACAAATTATATATCCTTGTATGCAAGT 1047341 |||| | |||| ||||||| | ||| || | |||| || ||||||||| Sbjct 11947 GGGAAGGCAAGAAAGTGATGATCAACCTTGTGCAGCTGTATTATACCCATGTATGCAATG 11888 Query 1047342 AGCAGATATTTTTGAATTAAATCCAAATGGAATTGATATTTGTCAACTTGGTGTTGATCA 1047401 || ||||||||| | ||||| | ||||||||| ||| | ||| | ||||| Sbjct 11887 TGCTGATATTTTTCACTTAAAAGC---------TGATATTTGCCAATTAGGTATGGATCA 11837 Query 1047402 AAGAAAAGTTAATATG 1047417 |||||| ||||||||| Sbjct 11836 AAGAAAGGTTAATATG 11821 >seq1326 Length=27586 Score = 104 bits (114), Expect = 2e-16 Identities = 254/374 (68%), Gaps = 12/374 (3%) Strand=Plus/Plus Query 344266 ACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTA-ACTTCCATTCT 344324 ||||| ||||| | ||||||||||| ||||| || || || ||| | ||| ||| | Sbjct 14349 ACCATGTGTTTTAAGCGTTGATAATAGGTTGGGCCTATAAAAATTCGAGACTCTAATTGT 14408 Query 344325 TTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGC--TTCATGTCCTAAAGCT 344382 | ||| || ||||||||||| ||||||||| || | || | || ||| Sbjct 14409 CT-TCCAGTATGCCCATTATACATAACTTCATTTCC--ATTCCTTTGAAAACCAGCAGCA 14465 Query 344383 ACTAAATCATCATTAAT-TTTATT-AATATTAACTCCTGTAAATGGAGTTGCATCTCCAT 344440 ||| || || || ||| || || | | ||| ||| || || || ||||| || | Sbjct 14466 TGTAACCTAT--TTGATATTTCTTCAACAGTGACTTTTGTGAAAGGTGTAGCATCACCTT 14523 Query 344441 ATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGACCTATCGTCA 344500 | |||| ||| |||||| ||||| |||| ||||||||| | || || || |||| Sbjct 14524 CCATGCCTTCAATAGCACAAGTCTTACCGAGTATACATTCAATAAGATGCCCAATAGTCA 14583 Query 344501 TACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCTGATTTTGTGA 344560 | | | || ||| || |||||| ||||| ||||| || | || || || || | Sbjct 14584 TTCTTGAAGGAATAGCATGAGGATTCATAATTATATCTGGTACTATCCCATCTTGAGTAA 14643 Query 344561 ATGGAAGATCTGCACGATGAATTTTAAATCC-AACTGTTCCTTTTTGTCCAGCTCTTGAT 344619 |||| | |||| | | | || | ||||| || ||| ||||| || ||| |||||| Sbjct 14644 ATGGCATATCTTC-CATTCTATATGTAATCCCAATTGTACCTTTCTGGCCATGTCTTGAA 14702 Query 344620 GAGAATTTATCACC 344633 | |||||||||||| Sbjct 14703 GCGAATTTATCACC 14716 >seq323 Length=6950 Score = 91.5 bits (100), Expect = 1e-12 Identities = 203/301 (67%), Gaps = 4/301 (1%) Strand=Plus/Plus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGG--TATTATGACTAATCTTA 552360 ||||| || ||| |||| || || | ||||| |||| || |||| | | || | | Sbjct 1273 GATGTGACACCTTTATCACTGGGAATTGAAACTCTTGGTGGAGTATT-TACCCGAT-TGA 1330 Query 552361 TCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATA 552420 | | |||||||||||||||| || ||| || || |||||||| | | || | Sbjct 1331 TTAACCGAAATACTACTATTCCAACAAAGAAAAGTCAGGTGTTTTCTACTGCTGCTGACA 1390 Query 552421 ATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATA 552480 |||||||| || || | | ||| ||||||| ||| || | | | ||||| | Sbjct 1391 ATCAAACTCAAGTAGGTATAAATGTATTTCAAGGAGAGAGAGAAATAGCAATGGATAACA 1450 Query 552481 ATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAA 552540 | | || ||| || ||||| |||||||| || || || | || || || |||| Sbjct 1451 AACTGCTGGGTCAATTCGATTTAATGGGTATTCCCCCAGCCCCAAGAGGTGTCCCTCAAA 1510 Query 552541 TTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAAT 552600 | || || || |||||||| ||||| ||||| ||| ||||||| | || ||||||| Sbjct 1511 TAGAGGTGACATTCGATATAGATGCTAATGGTATTATGAATGTAAGCGCAGTAGATAAAT 1570 Query 552601 C 552601 | Sbjct 1571 C 1571 Score = 86.0 bits (94), Expect = 5e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 ||||||||||||||||| || | | || | ||| | | |||||||||||| Sbjct 476 AAAATGAAACAAACAGCAGAAGCATACTTAGGACGTACAGTAAAACAAGCAGTAATAACT 535 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || || || || |||||||| || ||||| ||||| || || |||||||| || || Sbjct 536 GTGCCTGCTTACTTTAATGATTCTCAACGACAAGCAACAAAGGATGCTGGTAAAATAGCA 595 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 ||| | |||| | | ||||| ||||| || |||||||| || | || | |||| | Sbjct 596 GGATTAGATGTCTTAAGAATTATAAATGAGCCAACTGCTGCAGCTTTGGCTTTTGGAATG 655 Query 550532 GATAA 550536 || || Sbjct 656 GACAA 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029219952074620