Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_019505.1 Length=166452 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 5e-13 >seq1 Length=29879 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 140562 ACATTAAACTGATAGAACATATGACAAGGCGGTAATGCCATATATTTAAGTTCAGCTGGA 140621 |||| ||| ||| | || ||||||||||| ||||||||||||||||| | | ||| |||| Sbjct 29059 ACATAAAATTGAGATAATATATGACAAGGTGGTAATGCCATATATTTCATTGCAGATGGA 29000 Query 140622 TTCCACGCAGAAACAATTTGACGCCTATCATTTGGCAGTTTTTTAATACGATCAA-TAAC 140680 ||||| ||||| | || || | ||||||| || ||| |||| |||| ||| Sbjct 28999 TTCCATGCAGATAAGATATGTCTTCTATCATAAGGATTTTTCTTAAGTGATTCAATTAAA 28940 Query 140681 TTCTATAATTTGATCTACACC 140701 || |||| ||||||||| || Sbjct 28939 TTTGATAA-TTGATCTACTCC 28920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532508827981760