Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1254 334 5e-86 seq1188 273 1e-67 seq1246 197 9e-45 seq431 149 4e-30 seq581 131 1e-24 seq854 129 4e-24 seq323 114 8e-20 seq1326 107 1e-17 seq1 104 2e-16 seq62 100 2e-15 seq1229 95.1 8e-14 >seq1254 Length=47508 Score = 334 bits (370), Expect = 5e-86 Identities = 662/965 (69%), Gaps = 25/965 (3%) Strand=Plus/Plus Query 475318 TGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGA 475377 ||| ||| | ||||| | | ||||||||| | ||| |||| ||||||||||| || Sbjct 3236 TGATGTATCATTACTTACTATTGAAGATGGTATCTTCGAAGTAAAGGCAACAGCTGGTGA 3295 Query 475378 TTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTTGAAGATTT 475437 | ||||||||||||||||||| |||||||||||| | || || ||||| ||||||| Sbjct 3296 TACACATCTTGGTGGTGAAGACTTTGATAATAGATTAGTTGAATTCTGTGTCCAAGATTT 3355 Query 475438 CAAGAGGAAAAATAAAG---TTGATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAG 475494 ||| | || ||| | ||||| | | || ||| || || ||| | | || Sbjct 3356 TAAGCGTAAGAATCGTGGTCTTGATTTAACTACTAATGCCCGTGCTTTGAGAAGATTAAG 3415 Query 475495 AACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGT 475554 ||| ||||||||||| ||| || | |||||||| |||| ||| | || | ||| | Sbjct 3416 AACCCAGTGTGAACGTGCAAAGAGAACACTTTCTTCATCTACACAAGCAACAATCGAATT 3475 Query 475555 TGATTCTCTTTTTGAAGGAATTGATTA--TAATACTCTTATTACAAGGGCTAAATTTGAA 475612 |||||| | || ||||| ||||| || | || ||| || | | || | |||||| Sbjct 3476 GGATTCTTTGTTCGAAGGTATTGACTACTTTGTA-TCT-ATAAGTCGTGCAAGATTTGAG 3533 Query 475613 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGAT 475672 || ||||||||||| || | ||| | | || || || | || | | |||| Sbjct 3534 GAACTTTGTTCTGATTATTTCCGTGGCACATTAGCTCCAGTAGAGAAGGTATTAAAAGAT 3593 Query 475673 TCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATT 475732 ||| | | || || ||| ||||| |||| | ||||| |||||||| | ||| Sbjct 3594 TCTGGAATGGATAAGAGGTCAGTACATGATGTTGTATTAGTAGGTGGTTCAACCCGTATT 3653 Query 475733 CCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTA 475792 ||||| || | || | || | || ||||||||||| | | || ||| | Sbjct 3654 CCAAAGGTACAACAATTAATTCAAGAATTCTTTAATGGTAAGGAACCA--TGCAAGGCAA 3711 Query 475793 --AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTC 475850 ||||| |||||||||||||| ||||| ||||| || |||||||| || ||| ||| Sbjct 3712 TTAATCCAGATGAAGCTGTTGCTTATGGTGCTGCAGTTCAAGCAGCAATCTTAAATGGTG 3771 Query 475851 AATCAGACG--AGAAACTAAATAAT-ATTGTACTTGTTGACGTAACTCCACTTTCATTAG 475907 || ||| | || | || | | ||||| ||| || || ||||||| || |||| Sbjct 3772 AA-CAGTCATCAGTAGTGCAAGATTTATTGTTATTG--GATGTTGCTCCACTATCTTTAG 3828 Query 475908 GTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCAT 475967 || | ||||||| || || ||||||| || |||||||| | |||||| | || ||| Sbjct 3829 GTTTGGAAACAGCAGGTGGTGTTATGACAAAACTTATTGAACGTAATACTACCATTCCA- 3887 Query 475968 GCAAA-AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAA 476026 ||||| ||| | ||||||| | || ||| ||||||| || | |||| || ||| Sbjct 3888 GCAAAGAAAACTCAAGTATTCACAACATATGCTGATAACCAGAGTGGTGTACTTATTCAA 3947 Query 476027 ATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTT 476086 | |||||||||||| | | | || ||||||||| || ||| || | || || | Sbjct 3948 GTATTTGAAGGTGAACGTGCAATGACAAAAGATAATCACTTACTAGGTAAATTCCATTTA 4007 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 || |||||||| || ||||| | || || || ||||||||||| ||||||||||||||| Sbjct 4008 GATGGTATTCCACCAGCTCCACGTGGTGTACCACAAATTGAAGTAACTTTTGATATTGAT 4067 Query 476147 GCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAAC---AAGAGTAAAAAT 476203 |||||||| ||| | ||||| | || ||| || |||| | ||||| | || Sbjct 4068 GCAAATGGCATTTTAAATGTATCAGCAGTTGACAA---GAGTACCGGTAAGAGCAGCAAG 4124 Query 476204 ATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGAT 476263 || || ||||| || || ||| | || | | ||| | ||| ||||||||||| || Sbjct 4125 ATTACGATTACTAATGATAAAGGTCGTTTATCAAAGGAAGATATTGAACGTATGGTTAAT 4184 Query 476264 GAAGC 476268 || || Sbjct 4185 GATGC 4189 Score = 295 bits (326), Expect = 4e-74 Identities = 432/602 (72%), Gaps = 22/602 (4%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 ||||||||||||||||||| || || |||||| || || ||| | ||| | |||| Sbjct 2638 TTGGTATTGATTTAGGAACAACATATTCTTGTGTTGCCGTATGGAAGCATGATGCTGTAG 2697 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| ||| | ||||| || |||||||||||||| ||||| |||||| | |||||||| Sbjct 2698 AAATTATTCCAAATGATCAGGGTAATAGAACAACCCCATCTTATGTTGCATTTACTGATT 2757 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | |||| | | ||||| ||||| ||||| |||| | ||| ||| || | |||||| Sbjct 2758 CCGAACGTTTAATTGGTGATGCAGCTAAGAATCAGGTTGCTCGTAACCCAGAAAATACTG 2817 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | || ||||||||| | || |||||| | || ||||||||| |||| ||| ||| | Sbjct 2818 TATTCGATGCTAAACGTTTAATTGGTAGGAAATTTGATGATCAAGCTGTTCAAAGTGACA 2877 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGT---GGTAAACCATATATAGAAGCAA 474629 || |||||||| || ||||| || | | | ||||||| ||| || | Sbjct 2878 TGACACATTGGCCATTCAAGGTTGCTCGTGGTCCTAAAGATAAACCAATTATTAAA--AT 2935 Query 474630 TAC--ACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 ||| || ||||||||| || |||| | ||| ||||||| | ||||| ||| Sbjct 2936 TACCTACTTAGGTGAAACAAAGGAATTCCATGCTGAAGAAATTTCAGCTATGGTCTTACA 2995 Query 474688 CAAAATGAAACAAACCGCG--AGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAAT 474744 || ||||| | | | |||| || ||||| |||| ||| | |||| ||| | Sbjct 2996 AAAGATGAAGGAGATTTCTGAAGCT--TACCTTGGT-AAGACAGTTAAGAATGCTGTAGT 3052 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||| ||||| || ||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct 3053 TACAGTTCCTGCCTATTTCAATGATTCACAACGTCAAGCTACAAAGGATGCTGGTGCAAT 3112 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||| | || ||| | ||||||||||||||||| ||||| || || | |||||||| Sbjct 3113 TGCTGGTTTGAACGTTATGCGTATTATTAATGAACCTACAGCTGCTGCTATAGCTTATGG 3172 Query 474865 TCTTGATAAGAA---TTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGG 474918 |||||||||||| | ||| ||| |||||| || ||||| |||| |||| || Sbjct 3173 TCTTGATAAGAAAGGTACTG---GTGAAAGAAATGTCTTGATCTTCGATTTAGGTGGTGG 3229 Query 474919 TA 474920 || Sbjct 3230 TA 3231 >seq1188 Length=9750 Score = 273 bits (302), Expect = 1e-67 Identities = 393/548 (72%), Gaps = 7/548 (1%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||||||| | || |||||||| ||||| ||| | | ||||||| | ||| Sbjct 1526 ATTGGTATTGATCTTGGTACTACTTATTCATGTGTTGCTATCTATAAAAATGGAAGAGTT 1467 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 |||||||| | ||||| ||||||||||| | ||| ||||||||||| || ||||| ||| Sbjct 1466 GAAATAATACCAAATGATCAAGGTAATAGGATAACTCCATCATATGTCTCATTTACAGAA 1407 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 |||| ||||||||||| |||||||| |||||||| || |||||| | | ||| Sbjct 1406 GATGAAAGGCTTATTGGAGAAGCTGCTAAGAATCAAGCTACAATTAATCCATCTCAGACT 1347 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | ||||||| || ||| | ||||| ||| |||| ||| | || | ||| || Sbjct 1346 TTATTTGATGTAAAGAGACTTATTGGACGTCGTTTTACAGATGACTCTATTCAAAAGGAC 1287 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATA 474631 | || || |||| | | | || ||| ||| ||||| || || ||| | Sbjct 1286 AAAGTTCTTTTACCTTATGAAATTATTAATAAGAATGGCAAACCTTACATTAAAGT--TG 1229 Query 474632 CACGCAGG--TGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | ||| || |||||| | | |||||| | ||||| | ||||| ||| | | Sbjct 1228 CTGTCAAGAATGAGACGAAACAACTGCC-CCGGAAGAGGTTTCTGCTATGGTATTAACTA 1170 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 ||||||| | | || ||| | ||||||||| | ||||| | |||| || ||||| Sbjct 1169 AAATGAAGGAGATTGCTGAGG-CTTATCTTGGAAAGGAAGTTAAACATGCTGTTGTTACT 1111 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||||||||| ||||||||| |||| | ||||| || |||||||| ||| |||||| Sbjct 1110 GTTCCAGCATACTTTAATGATGCTCAGAGACAAGCTACAAAAGATGCAGGAGCTATTGCA 1051 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 ||||| |||||| | ||||| |||||||| || ||||| || || | |||| |||| | Sbjct 1050 GGTCTAAATGTTATTCGTATAATTAATGAGCCTACAGCTGCAGCTATAGCTTTTGGTTTA 991 Query 474869 GATAAGAA 474876 ||||| || Sbjct 990 GATAAAAA 983 Score = 183 bits (202), Expect = 2e-40 Identities = 399/589 (68%), Gaps = 25/589 (4%) Strand=Plus/Minus Query 475601 GCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAA 475660 ||||| ||||| || | | | || || |||||| |||| || || || ||| || | Sbjct 654 GCTAAGTTTGAGGAATTAAATGCAGACCTATTTAGACAAACTATGGAGCCTGTTAAAAAG 595 Query 475661 GTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGT 475720 ||| | | |||| | | | | ||||| | || ||||| ||||| | || || ||| Sbjct 594 GTTTTGAAAGATGCAGATATGAAGAAATCTGATGTACATGAGATTGTCTTAGTTGGTGGT 535 Query 475721 TCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT-----TTTAATGGTAAAA 475775 || || | ||||| ||||| ||| |||| || | | ||| |||| ||| Sbjct 534 TCTACTCGTATTCCTAAAATCC----AAT-CTTTAATTAAAGATTTCTTTGATGGGAAAG 480 Query 475776 AGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 | |||| | | | ||||||||||| ||||| || ||||| |||||||| ||||| | Sbjct 479 AACCAAATAGAGGAATTAATCCTGATGAGGCTGTAGCTTATGGTGCTGCTGTTCAAGCTG 420 Query 475836 CTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 |||| | | ||| || | | || | || |||||| | || ||||||| Sbjct 419 GTATTCTTGCTGGTGAAGGTG----GTAAGGACTTATTATTGT-----TAGATGTAACTC 369 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 | | | |||||| | || ||||||||||| ||||||| || |||||| ||||||| Sbjct 368 CTTTAACCTTAGGTATCGAGACAGTTGGAGGAGTTATGACAAAACTTATTCCTAGAAATA 309 Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTC--CACTTATTCTGATAATCAAACAAC 476013 | | | || | | || || | | |||||| |||| | ||||||||| | | Sbjct 308 CAGTTGTTCC-TACGAAGAAGGGACA-AATTTTCAGTACTTCTCAAGATAATCAACCCGC 251 Query 476014 TGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTT-G 476072 ||| || ||| | |||||||||||| | | || ||||||||||| |||| | Sbjct 250 AGTATTAATACAAGTTTTTGAAGGTGAACGCTCCATGACAAAAGATAATAATTTACTTGG 191 Query 476073 GAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 ||| ||| ||| | |||||||| || || || ||||| || ||||| || ||||||| Sbjct 190 GAAATTTGAAT-TAACTGGTATTCCCCCAGCCCCTAGAGGTGTCCCTCAGATAGAAGTTA 132 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||||||| |||||| | ||||||||||| | || | |||| ||||| Sbjct 131 CTTTTGAAATTGATACTGATGGTATTCTTCAAGTCAGTGCTGAAGATAA 83 >seq1246 Length=36248 Score = 197 bits (218), Expect = 9e-45 Identities = 261/354 (74%), Gaps = 20/354 (6%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 ||||| |||||||||||||||||||||||||||||||||| | | ||||||| ||| Sbjct 27369 GTTTTTGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGCTTCTTTATATTATCCATTT 27428 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATAT-TGCAGATTTTATAACAGAATC 297440 ||||| ||| ||| || | ||||| | |||||||||| ||| ||| Sbjct 27429 AAAAAT----AAAGATTACT---TTAATGAGATTTTTCCTGCAGATTTTGTAAGTGAAGG 27481 Query 297441 AATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAA 297500 | | ||||||||||| |||||||||||||| ||| | || | |||||||| ||||| | Sbjct 27482 ATTGGATCAAACAAGGGGTTGGTTTTATACCTTAATGATTTTATCTACAGCATTATTTGA 27541 Query 297501 CAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAA 297560 || ||||| ||||||||| | ||||||| ||| ||||| ||| | ||||| |||| Sbjct 27542 TAAGCCAGCTTTTAAAAATCTTATTGTTAGTGGACTTGTTTTAGCATCAGATGGTAAAAA 27601 Query 297561 AATGTCAAAAAG---TAAAGGTAATTATCCTGATCCAAAT-ATTTTGATGGATAAATATG 297616 ||||||||| || |||| |||||||| || ||| | | ||| | ||||||||| Sbjct 27602 AATGTCAAAGAGACTTAAA---AATTATCCAGACACAATTGAAGTTG-TCAATAAATATG 27657 Query 297617 GTGCAGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGa 297668 |||| ||| ||||| | |||| | |||| || |||| || || | ||| || Sbjct 27658 GTGCTGATGCTTTAAG--ATTATATCTTATTAATTCACCAGTTGTAAGAGCTGA 27709 Score = 156 bits (172), Expect = 3e-32 Identities = 342/499 (69%), Gaps = 24/499 (5%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 || || || |||||||| || ||| || | |||||||| |||||||||| |||| Sbjct 25908 GACGGTCCACCATTTGCAACCGGATTACCA--CATTATGGTCATATTTTAGCTGGTACTA 25965 Query 295853 TTAAAGATACCATGACTAGATATTTA--ACAATGAATGGTTATCAAGTTAATATGGGAAT 295910 | || |||| || ||| ||||| | |||| || ||||| | | | | | | | Sbjct 25966 TCAAGGATATAATTACTCGATATGCACAACAA--AAAGGTTACTATTGTGAAAGGCGTTT 26023 Query 295911 TGGTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGAT 295966 |||||||||||| ||||| | || ||||| ||| ||| | ||| ||| | || Sbjct 26024 TGGTTGGGATTGTCATGGTTTACCTGTTGAATATGAAATTGAC-----AAATTATTGAAT 26078 Query 295967 ATATCACAAAGAAA-GATTTATTGGAATACGGT-ATTGATCGTCATAATGATATTTGTCG 296024 |||||| ||| | ||| || | |||| || |||||| ||||||| ||||| Sbjct 26079 ATATCAGGTAGAGATGATATAATT-AATATGGGGATTGATAAGTATAATGAGTCATGTCG 26137 Query 296025 TGATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATG 296084 | ||| ||||||| || |||||| || ||| | | || | |||||||||| Sbjct 26138 GGCTATTGTATTAAGATATACTGAAAAGTGGAGGACAACAGTAGAACGTGTTGGAAGATG 26197 Query 296085 GATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTG 296144 ||||||| || ||||||| ||| ||||||||| |||||| || |||| || Sbjct 26198 GATTGATTTTGATAATGATTATCGCACAATGGATCCTTCATTTATGCAAAGTGTTTGGTG 26257 Query 296145 GTCATTTAAACAACTTTATGA-AAAGGAAATGATTTTTGA-AGGTTATAAAGTTATGCCT 296202 | |||||||||| | ||||| ||||| || | | | | || |||| || ||||| Sbjct 26258 GGTATTTAAACAATTATATGATAAAGG--ATTAGTATACAGAGCATATAGGGTAATGCCA 26315 Query 296203 TATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAG 296262 || |||||| ||| | |||||| ||||| ||||||| || || ||||||||||| Sbjct 26316 TACTCTACTATTTGTAGTACACCTTTATCAAATTTTGAAGCCAATTTGAATTATAAAGAT 26375 Query 296263 ATTATTGATCCATCTGTTA 296281 | | ||||||||| ||| Sbjct 26376 GTAAGCGATCCATCTATTA 26394 >seq431 Length=1763 Score = 149 bits (164), Expect = 4e-30 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || || | || ||||||| |||||||||||||||||||||||| || | ||| Sbjct 155 AATATTGTAGTCTGATAAAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACG 214 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||||||||| ||||| ||||| ||||||||||| |||||| || ||| |||||| || Sbjct 215 TTGTTGATCTGGAGGTATTCCCTCCTTGTCTTGTATCTTTGCCTTTACATTTTCAATTGT 274 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || | ||| | ||||||||||| || || | || ||||| |||||||| Sbjct 275 ATCAGAAGGTTCAACTTCTAATGTAATAGTTTTCCCAGTTAAGGTTTTAACAAAAATTTG 334 >seq581 Length=7318 Score = 131 bits (144), Expect = 1e-24 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||||||||||| || ||| | ||| |||||||| || ||||||||||| | | Sbjct 1218 AATATTATAATCAGATAAAGTCCGACCATCCTCAAGTTGTTTCCCAGCAAAAATTAATCT 1277 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 |||||||||||| ||||| ||||| || |||||||| || || ||| ||||||||| Sbjct 1278 TTGTTGATCAGGTGGAATCCCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATAGT 1337 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || | |||||| || || |||||||| || | |||||| || ||||| || Sbjct 1338 ATCAGATGGTTCAACTTCAAGTGTTATTGTTTTACCCGTTAAAGTCTTCACAAAAATCTG 1397 >seq854 Length=22821 Score = 129 bits (142), Expect = 4e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 ||||| || || |||||||| ||||| || ||||| | || ||| | | |||||||| Sbjct 6277 GATTTCTCTTCACCAAATATAGCAAAAGAGATGCACGTAGGTCACCTACGTTCTACAATT 6218 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 ||||| || | ||||| | |||| ||||| || |||| |||||||| | |||||| Sbjct 6217 ATTGGGGATACAATTTGTCGTATATTTGAATATTTAGGATATGAAGTACTTCGCATAAAT 6158 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 ||| |||| |||||||||||||||||||| ||| | |||| ||| Sbjct 6157 CATGTTGGAGATTGGGGAACACAATTTGGAATGCTCATTGAATA 6114 >seq323 Length=6950 Score = 114 bits (126), Expect = 8e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 474689 AAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 |||||||||||||| || |||| | |||| ||||| | |||||||| ||| Sbjct 476 AAAATGAAACAAACAGCAGAAGCATACTTAGGACGTACAGTAAAACAAGCAGTAATAACT 535 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || || || || ||||||||||||||||| |||||||| || ||||| || | ||| ||| Sbjct 536 GTGCCTGCTTACTTTAATGATTCTCAACGACAAGCAACAAAGGATGCTGGTAAAATAGCA 595 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || | |||| ||| | ||||| ||||| ||||| || || || | |||| ||| Sbjct 596 GGATTAGATGTCTTAAGAATTATAAATGAGCCAACTGCTGCAGCTTTGGCTTTTGG 651 Score = 95.1 bits (104), Expect = 8e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 290843 GCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCT 290902 || || ||||| ||||||||||||||||| ||||| | ||||| ||||| | | ||| Sbjct 636 GCAGCAGTTGGCTCATTTATAATTCTTAAGACATCTAATCCTGCTATTTTACCAGCATCC 577 Query 290903 AAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCtttttcc 290962 ||||| || ||||| | ||||||||| |||||||| || || || || |||| || Sbjct 576 TTTGTTGCTTGTCGTTGAGAATCATTAAAGTAAGCAGGCACAGTTATTACTGCTTGTTTT 517 Query 290963 actttctttttcaaataattttctgccatttgttttattt 291002 ||| | | || || |||||| ||||||| |||| Sbjct 516 ACTGTACGTCCTAAGTATGCTTCTGCTGTTTGTTTCATTT 477 >seq1326 Length=27586 Score = 107 bits (118), Expect = 1e-17 Identities = 254/376 (68%), Gaps = 22/376 (6%) Strand=Plus/Plus Query 269140 GCTCTAGAGTGAGTTTTATCGCCCACCATTTGTTTTAAACGCTGATAATATGTCGGACCA 269199 ||||||| ||| | || || | ||||| |||||||| || |||||||| || || || Sbjct 14325 GCTCTAGCATGAATCTTGTCATCAACCATGTGTTTTAAGCGTTGATAATAGGTTGGGCCT 14384 Query 269200 ATAAATATTTT-GACATGCATTTTTTCTCCCGTCATACCATTTGTCATTGTTTCATTTCC 269258 ||||| ||| ||| ||| | | ||| || ||||| ||| ||||||||| Sbjct 14385 ATAAAAATTCGAGACTCTAATTGTCT-TCCAGTATGCCCATTATACATAACTTCATTTCC 14443 Query 269259 CCATGC--TTCATATCC----GTATGAAAC-TAGTTCATCATTTATTTTATTAATATCTA 269311 || | || | | || | ||| ||| || || || |||| | || | | Sbjct 14444 --ATTCCTTTGAAAACCAGCAGCATGTAACCTATTTGAT-----ATTTCTTCAACAGTGA 14496 Query 269312 CACCTGTAAATGGTGTCGCATCACCATATACTCCTTTAATAGCACATACTTTTCCTAATA 269371 | ||| || ||||| |||||||| | | |||| ||||||||| || || | || Sbjct 14497 CTTTTGTGAAAGGTGTAGCATCACCTTCCATGCCTTCAATAGCACAAGTCTTACCGAGTA 14556 Query 269372 GACATTCAATCAATTGTCCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAATAA 269431 ||||||||| | || ||||| ||||| | | || ||| || |||||| ||||| | Sbjct 14557 TACATTCAATAAGATGCCCAATAGTCATTCTTGAAGGAATAGCATGAGGATTCATAATTA 14616 Query 269432 TATCTGGCACAAGTCCAGATTTAGTAAATGGCATATCTGC---TCTATGAATTTTAAATC 269488 ||||||| || | ||| || |||||||||||||||| | ||||| | ||| | Sbjct 14617 TATCTGGTACTATCCCATCTTGAGTAAATGGCATATCTTCCATTCTAT---ATGTAATCC 14673 Query 269489 CAACTGTACCTTTTTG 269504 ||| ||||||||| || Sbjct 14674 CAATTGTACCTTTCTG 14689 >seq1 Length=29879 Score = 104 bits (114), Expect = 2e-16 Identities = 243/359 (68%), Gaps = 12/359 (3%) Strand=Plus/Minus Query 330936 AAAATT-ATATAAAATATGACATGGAGGAAGTGCCATTTTATTAATATCCACTGGATTCC 330994 |||||| | |||| |||||||| || || | |||||| | || || | |||||||| Sbjct 29055 AAAATTGAGATAATATATGACAAGGTGGTAATGCCATATATTTCATTGCAGATGGATTCC 28996 Query 330995 ATAAATTAATAATAATTCTTCTATCTGTCGGATTATTTTTAATTGCTTCGATACAttttt 331054 || | | ||| ||||||||| ||||| || |||| || ||| || | ||| Sbjct 28995 ATGCAGATAAGATATGTCTTCTATCATAAGGATTTTTCTTAAGTGATTCAATTAAATTTG 28936 Query 331055 ttAATTGATCAATTCCTTGCCCGCTGTAATCTTTTTTACAATTT-TCATATGTTGCACCA 331113 ||||||||| | ||||||||| | |||| | | | || | | | |||| |||| | Sbjct 28935 ATAATTGATCTACTCCTTGCCCATTATAAT-TATCATGCATTGTCTTATATTCTGCATTA 28877 Query 331114 AAATATCTCATTTGGAAACCATATCCAGGACCTATATCACCTACATC---ATAATCCAGA 331170 |||| |||| ||| ||||||||| ||||| | ||| | || |||| | ||| Sbjct 28876 AAATGTCTCCATTGAAAACCATATATTGGACCCAAGTCATTCTCTTCTCGATAACCTAGA 28817 Query 331171 CCATTTTTATCTAAAAAATCACGTGATGAATTTTTATCCCAAATATGAACACCGGCTTTT 331230 ||| |||||| ||| | || |||| ||| | |||||||| || || ||| Sbjct 28816 CCAATTTTATTCAAATACTCTTTTGATCCATTACCAGCCCAAATA--AATACTTT-TTTA 28760 Query 331231 TGTAAAAC---ATTAACATCAGTACTGCCTCTTATCATCCACATTAATTCTTCAAATAT 331286 | ||| | |||| ||| ||| ||| |||| | |||||||||||| ||||| || Sbjct 28759 TCTAATAAGTGATTACCATTTGTATCACCTTTTATAAACCACATTAATTCCTCAAAAAT 28701 >seq62 Length=14813 Score = 100 bits (110), Expect = 2e-15 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 356436 TCTTACATTTAGTGGTTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAAC 356495 ||| |||||||| |||||||||| |||||||| | |||||||| || | ||| |||| Sbjct 8604 TCTAACATTTAGAAGTTTTCCTTTCAATGGGAATACTCCATAATAGTCACGTCCAACAAT 8545 Query 356496 ATTTAATCCAGACATAGCAA-ATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTAC 356554 | ||| |||| || ||||| ||| ||||| ||||||||||| || || |||| |||| Sbjct 8544 AGATAAGCCAGCCA-AGCAAGATGTCTTAGCCGAATCTCCTTCTGTCAGTATTAGTGTAC 8486 Query 356555 ATTT 356558 |||| Sbjct 8485 ATTT 8482 Score = 100 bits (110), Expect = 2e-15 Identities = 199/284 (70%), Gaps = 22/284 (8%) Strand=Plus/Minus Query 355247 ATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAA 355306 ||||||| |||||||| || | || |||||||| | ||||||||| | |||||||| | Sbjct 9670 ATCCAGTACCAATACCATCAGCACCGTTAACTAAGACCATTGGAATGATTGGTACATAGA 9611 Query 355307 ATACTGGTTCAATCATTTTA---TTATCTT-CAAATTGATGTTGCAATACATCAAAATCA 355362 ||| |||||||| || | | ||||| || || || | |||| |||| ||| Sbjct 9610 ATAAAGGTTCAATTTGTTGACCATCATCTTGCAGATATAT-TAACAATGGATCA---TCA 9555 Query 355363 TGTTGTATGAAAATATATTTAGTTAA--TTGATTGAGTTGTGTGAAGATATATCGTGCA- 355419 || | ||||||||| ||| | | ||| | || ||| || || || || ||| Sbjct 9554 GCTTCTGGGAAAATATAACGAGTCCAAGTAGAT--AATTTTGTAAATATGTAACGGGCAG 9497 Query 355420 --CTTGCATTATCTTTGCCTCCA-CTTAATCTTG-TACCAAATTGACCATTGGGAAGTAA 355475 ||||||| | ||||| || ||| || || |||||||||||||| || | | Sbjct 9496 CACTTGCAT---CCTTGCCACCTTCTT--TCCTGCTACCAAATTGACCACATGGCTGAAG 9442 Query 355476 TAAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTA 355519 ||| || | ||||||||||||||| ||| ||| ||||| |||| Sbjct 9441 TAAGTTCAAATTGTTACTTCCAACAAAATCTTGCGCCATATTTA 9398 >seq1229 Length=5282 Score = 95.1 bits (104), Expect = 8e-14 Identities = 107/143 (75%), Gaps = 3/143 (2%) Strand=Plus/Plus Query 629945 TTTTATGGACCTCCTGGTACAGGTAAAACATCTGCAATTTTAGCTATGGGACGAGAAATA 630004 || |||||||||||||| |||||||| |||||||||||| | ||| | | || ||| || Sbjct 4255 TTCTATGGACCTCCTGGGACAGGTAAGACATCTGCAATTCTTGCTCTTTGTCGTGAACTA 4314 Query 630005 TTT---AAAGAACATTTTCCAACGAGAGTAATAGAATTTAATGCCTCTGATGATAGAGGA 630061 ||| || || | ||| || | | | ||| | ||||| |||||||| |||||| Sbjct 4315 TTTGGAAATGATGAATTTAGAAATCGTACATTGGAACTGAATGCATCTGATGAAAGAGGA 4374 Query 630062 ATTAATGCAGTTAGAGAAAAAAT 630084 ||||||| |||| | || ||||| Sbjct 4375 ATTAATGTAGTTCGTGAGAAAAT 4397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268117517202824