Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq581 168 1e-36 seq431 163 5e-35 >seq581 Length=7318 Score = 168 bits (186), Expect = 1e-36 Identities = 175/228 (77%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||||| || || | || | ||| || || | || || ||||||||| || || Sbjct 1174 ACCACCTCTTAAACGTAAAACTAAATG-AAGGTTGATTCCTTCTGAATATTATAATCAGA 1232 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 ||| || | | ||| || | |||||| || |||||||||||||| ||||||||||| || Sbjct 1233 TAAAGTCCGACCATCCTCAAGTTGTTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGG 1292 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || |||||||||||||| ||||| | |||| |||| ||||||||| || | ||||| Sbjct 1293 AATCCCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATAGTATCAGATGGTTCAAC 1352 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || ||||| |||||||| |||| || || ||||| || ||||| Sbjct 1353 TTCAAGTGTTATTGTTTTACCCGTTAAAGTCTTCACAAAAATCTGCAT 1400 >seq431 Length=1763 Score = 163 bits (180), Expect = 5e-35 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 193157 ATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTG 193216 ||| || |||| ||| || |||||| ||||| ||||| ||||| ||| || | ||| Sbjct 134 ATGTAAAGTAGACTCCTTCTGAATATTGTAGTCTGATAAAGTTCTGCCATCTTCAAGTTG 193 Query 193217 TTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTT 193276 ||||| ||||| ||||| | |||||||| ||||||||||| || || |||||||| || Sbjct 194 CTTTCCAGCAAAGATTAAACGTTGTTGATCTGGAGGTATTCCCTCCTTGTCTTGTATCTT 253 Query 193277 GGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336 | |||| |||| ||| ||||| |||| |||||||||| || |||||||| || || Sbjct 254 TGCCTTTACATTTTCAATTGTATCAGAAGGTTCAACTTCTAATGTAATAGTTTTCCCAGT 313 Query 193337 TAGCGTTTTTACAAATATTTGCATT 193361 || ||||| ||||| ||||||||| Sbjct 314 TAAGGTTTTAACAAAAATTTGCATT 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899638228712160