Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq431 82.4 6e-11 >seq431 Length=1763 Score = 82.4 bits (90), Expect = 6e-11 Identities = 166/245 (68%), Gaps = 1/245 (0%) Strand=Plus/Minus Query 107538 ATTTATAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACC 107597 |||| ||||| || | ||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct 354 ATTTGTAAGAC-TTAAGAATGCAAATTTTTGTTAAAACCTTAACTGGGAAAACTATTACA 296 Query 107598 GTCGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAA 107657 | ||| || || ||||| | | | ||||| |||||| || || || Sbjct 295 TTAGAAGTTGAACCTTCTGATACAATTGAAAATGTAAAGGCAAAGATACAAGACAAGGAG 236 Query 107658 GGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAA 107717 || | || ||||| || | | || | ||| || || || || || || | || | Sbjct 235 GGAATACCTCCAGATCAACAACGTTTAATCTTTGCTGGAAAGCAACTTGAAGATGGCAGA 176 Query 107718 ACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGA 107777 || | | |||||||| ||||| ||||||||||| || || | || ||||| || || Sbjct 175 ACTTTATCAGACTACAATATTCAGAAGGAGTCTACTTTACATTTAGTTTTGAGGTTACGT 116 Query 107778 GGGGG 107782 || || Sbjct 115 GGTGG 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398869809434782