Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq581 174 2e-38 >seq581 Length=7318 Score = 174 bits (192), Expect = 2e-38 Identities = 188/248 (76%), Gaps = 7/248 (3%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || ||||| || |||||||| || |||| || |||| | Sbjct 1399 TGCAGATTTTTGTGAAGACTTTAACGGGTAAAACAATAACACTTGAAGTTGAACCATCTG 1340 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| |||||| ||| ||||||||| |||||||| ||||||| Sbjct 1339 ATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGGATTCCACCTGATCAAC 1280 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | |||||||| || |||||| | || ||| | | || ||| | |||||||||| Sbjct 1279 AAAGATTAATTTTTGCTGGGAAACAACTTGAGGATGGTCGGACTTTATCTGATTATAATA 1220 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT------AAATAAA 146265 | || || ||||| || | |||||||| ||||| |||||||| ||| || |||| Sbjct 1219 TTCAGAAGGAATCAAC-CTTCATTTAGTTTTACGTTTAAGAGGTGGTTCTTGCAATTAAA 1161 Query 146266 TATTGAAA 146273 ||||| || Sbjct 1160 TATTGGAA 1153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786152268658960