Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq581 86.0 1e-11 >seq581 Length=7318 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/132 (73%), Gaps = 11/132 (8%) Strand=Plus/Plus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 |||||||||| |||||||||||||||| ||| | || || || | ||| Sbjct 1208 ATTCCTTCTGAATATTATAATCAGATAAAGTCCGACCATCCTCAAGTTGTTTCCCAGCAA 1267 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | |||| |||||||||| | || | || |||| ||||||||||| || || |||| || Sbjct 1268 AAATTAATCTTTGTTGATCAGGTGGAATCCCTTCTTTATCTTGAATTTTAGCCTTTACAT 1327 Query 81760 TTTCAATCGTAT 81771 ||||||| |||| Sbjct 1328 TTTCAATAGTAT 1339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903394961183680