Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_025425.1 Length=163424 Score E Sequences producing significant alignments: (Bits) Value seq775 84.2 2e-11 >seq775 Length=2148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 167/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 49140 ATAAAATGTTTACGGCACACAGAAACATATTTATCCTCTGCACCAACTTCGATTTGAGCA 49199 ||| | || | |||||||||||||||||| | || | |||||| || ||||| || Sbjct 744 ATATAGTGCTCACGGCACACAGAAACATAACTTTCATTACCACCAATTTTAATTTGTTCA 803 Query 49200 CCATCGCGAATAACACTACCATCTTTATCTACACGAAGGACCATTGTTGCTTTCTTACCA 49259 ||||| || || | |||| |||||| || | | ||||||||| ||| ||||| Sbjct 804 CCATCTAAAACAATATCACCACATTTATCAACTCTCATAGTCATTGTTGCCTTCCTACCA 863 Query 49260 CAATGACAAATACCCTTCATTTCGACCAGTTTATCA-GCAAATGCCATCAATGCCGCAGA 49318 || ||||| ||| ||| | ||| | | ||||||| | || || ||| | | Sbjct 864 CAGTGACAGATAGTCTTAACTTCAATTAATTTATCACACCAAGCTAATAAATATTG-ACT 922 Query 49319 TCCTTCAAATAGATTGCCCT-GAAAGTCAGTGCGGAGACCATAACACAGGACAGGGATAT 49377 ||||||||||| ||| ||| ||| ||||| | | |||||||| | ||||| || | Sbjct 923 TCCTTCAAATA-ATTCTCCTCTAAAATCAGTCCTTAATCCATAACATAAAACAGGTATTT 981 Query 49378 TT 49379 || Sbjct 982 TT 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522819402152320