Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq431 87.8 2e-12 >seq431 Length=1763 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| ||||| || ||| | || || | ||||| ||| | Sbjct 337 ATGCAAATTTTTGTTAAAACCTTAACTGGGAAAACTATTACATTAGAAGTTGAACCTTCT 278 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | ||||| ||| || || || ||||| ||||| || ||||| Sbjct 277 GATACAATTGAAAATGTAAAGGCAAAGATACAAGACAAGGAGGGAATACCTCCAGATCAA 218 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | | || || ||||| ||||||| |||| | | || |||||| Sbjct 217 CAACGTTTAATCTTTGCTGGAAAGCAACTTGAAGATGGCAGAACTTTATCAGACTACAAT 158 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATT 25392 ||||| || || || || | |||||||| || || || Sbjct 157 ATTCAGAAGGAGTCTACTTTACATTTAGTTTTGAGGTT 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445086399428160