Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq431 105 7e-18 seq581 95.1 1e-14 >seq431 Length=1763 Score = 105 bits (116), Expect = 7e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTG 134569 |||| || || ||||| ||||| |||||||| | || | | || | || || || || Sbjct 135 TGTAAAGTAGACTCCTTCTGAATATTGTAGTCTGATAAAGTTCTGCCA-TCTTCAAGTTG 193 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || ||||| || ||||| || ||||| || ||||| || || || ||||| || || Sbjct 194 CTTTCCAGCAAAGATTAAACGTTGTTGATCTGGAGGTATTCCCTCCTTGTCTTGTATCTT 253 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 | || || || | ||| || || | ||| || || | ||||| ||||| || || Sbjct 254 TGCCTTTACATTTTCAATTGTATCAGAAGGTTCAACTTCTAATGTAATAGTTTTCCCAGT 313 Query 134690 TAAAGTTTTAACGAAAATTTGCATT 134714 ||| |||||||| |||||||||||| Sbjct 314 TAAGGTTTTAACAAAAATTTGCATT 338 >seq581 Length=7318 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || || || | || || || |||||||| ||||| || || || Sbjct 1175 CCACCTCTTAAACGTAAAACTAAATGAAG-GTTGATTCCTTCTGAATATTATAATCAGAT 1233 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || || ||||| || |||||||| || | || ||||| || || Sbjct 1234 AAAGTCCGACCATCCTCAAGTTGTTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGA 1293 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||||||||| || || || | || || || | ||| || Sbjct 1294 ATCCCTTCTTTATCTTGAATTTTAGCCTTTACATTTTCAATAGTATCAGATGGTTCAACT 1353 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || |||||||| |||||||| || || ||||| ||||| Sbjct 1354 TCAAGTGTTATTGTTTTACCCGTTAAAGTCTTCACAAAAATCTGCAT 1400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505389315463760