Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_030117.1 Length=125171 Score E Sequences producing significant alignments: (Bits) Value seq1348 82.4 6e-11 >seq1348 Length=40868 Score = 82.4 bits (90), Expect = 6e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 108465 AACAAATATTAACTGGACTTCAATATATTCATGGaaaaaaaaTTATTCATCGAGATATAA 108524 ||||| || || ||||| || ||||| | || ||| | ||| |||||| ||| ||| Sbjct 13061 AACAATTAATATCTGGAATTGAATATTGTTATATAAATAGAATATGTCATCGTGATTTAA 13120 Query 108525 AAACTGAAAATATTTTCTTGGATAATGACTCTAATGTTTGTATAGGTGATTTTGG 108579 || ||||||||||||| |||||||| | | |||| | |||||||||||||| Sbjct 13121 AACCTGAAAATATTTTATTGGATAAACAATGTAATATAAAAATAGGTGATTTTGG 13175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 400415382347176