Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq196 232 7e-56 >seq196 Length=8782 Score = 232 bits (256), Expect = 7e-56 Identities = 520/762 (68%), Gaps = 37/762 (5%) Strand=Plus/Minus Query 23219 TTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTT 23278 |||| ||||| | || ||| | || ||||| || || ||||| | |||||| ||| | Sbjct 7534 TTTGGTATTCAGCTACTCGTTTCTCAAAAAAGTTAGTTTTACCTTGTAATGAAATAAGAT 7475 Query 23279 CCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTT---ACATGATAATTC---CT 23332 |||| ||||||||||||| | ||| |||| |||| |||| || | | | Sbjct 7474 CCATCCAATCAAATGGATTCGTGACATTGTATAA--CTTTGGAACATC-TAGTGCAAACA 7418 Query 23333 TTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTA 23392 |||| | ||| || ||||||||||||||||| ||| || | | || || || | Sbjct 7417 GTAAACG---ATCAGCAACAAATTCAATATATTGGGCCATTAATCTAGAATTCATCCCAA 7361 Query 23393 TTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAA 23452 | || | ||| || | | |||| |||| ||| ||||| |||||| ||| | Sbjct 7360 TGAGATCTACAGGTAATGAATCACATAAAAATGTACGTTCAACTTCAACAGCTTCTGCTA 7301 Query 23453 TTATTTGAACAATAACTTCTTCACTAGGTGGAT-ATT--TTAAATACTTAAACAATAAAC 23509 | |||| | |||| ||||| || || ||| |||| ||| | | ||||| Sbjct 7300 TAATTT---CTTGAACTCTTTCACATGGAAGACGATTATTTAATGTTTTATAAAGTAAAC 7244 Query 23510 ATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATC 23569 || |||| || ||| | |||||||| ||| || | |||||||||||||||||||| Sbjct 7243 ATCCAAAGTCCGCATGAATACCTTCATCTCTAGATATTAGTTCATTAGAAAATGTTAATC 7184 Query 23570 CTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT-CCGGAAAAGAAA 23628 | ||||||||||| ||||| |||| ||||||||| ||| |||| | | || ||||| || Sbjct 7183 CAGGCATTAATCCACGTTTCTTAAGCCAAAATATAGCA-CAAAAGCTGCCAGAAAACAAG 7125 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTAC--CAAATGTTGCATTATAATCAG 23686 ||||| ||||| | | |||| |||| | || | | |||||| ||||| || Sbjct 7124 ATACCTTCAACTG-CACAAAAGCCA-ATTACTCTTTCTGCAAATGACCGATTATTAT--- 7070 Query 23687 AAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACT--CAATTGTTTCAATTGC 23744 ||||| ||| ||| ||| | ||||| | ||||| || || || | ||||| Sbjct 7069 TCATCCACTTTGTTGCCCATTCTGCCTT-AGTTTTAACTGCTGGTAAATG-TGATATTGC 7012 Query 23745 TTTTAAGAGAAAAGTTT---TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACT 23801 || || || | ||| |||| ||||| ||||||| |||||||| | Sbjct 7011 TTCAAAAAGCA---TTTGGCGATCTTTTACATCTGATATATATTGATCAATTAAAAGGGA 6955 Query 23802 ATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTC 23861 ||| ||||| ||||| | || |||||||| ||||| |||||| | ||||||||| Sbjct 6954 ATAAGTTTCACTGTGAATCTGCTCCATAGCAATTTGAAATCCATAATACATTCTAGCTTC 6895 Query 23862 AGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACT 23921 | ||||| || || ||||| || |||||| || || | ||||| |||||||| Sbjct 6894 TTCTATTTGAATCTCCTTTAAAAAATTTACAGCTAAGTTCTCCATTACAATTCCATCACT 6835 Query 23922 AGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 23963 ||| ||||| || || | |||||||| ||||||||| |||| Sbjct 6834 AGCTGCAAAAAATGCTAAGACATATTTAATAAAATGTTTTTC 6793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521478626253200