Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_000866.4 Length=168903 Score E Sequences producing significant alignments: (Bits) Value seq71 89.7 6e-13 >seq71 Length=86954 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 144622 ACATTAAACTGATAGAACATATGACAAGGCGGTAATGCCATATATTTAAGTTCAGCTGGA 144681 |||| ||| ||| | || ||||||||||| ||||||||||||||||| | | ||| |||| Sbjct 85782 ACATAAAATTGAGATAATATATGACAAGGTGGTAATGCCATATATTTCATTGCAGATGGA 85723 Query 144682 TTCCATGCAGAAACAATTTGACGCCTATCATTTGGCAGTTTTTTAATACGATCAA-TAAC 144740 ||||||||||| | || || | ||||||| || ||| |||| |||| ||| Sbjct 85722 TTCCATGCAGATAAGATATGTCTTCTATCATAAGGATTTTTCTTAAGTGATTCAATTAAA 85663 Query 144741 TTCTATAATTTGGTCTACACC 144761 || |||| ||| ||||| || Sbjct 85662 TTTGATAA-TTGATCTACTCC 85643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540360688139800