Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq71 120 2e-22 >seq71 Length=86954 Score = 120 bits (132), Expect = 2e-22 Identities = 277/415 (67%), Gaps = 12/415 (3%) Strand=Plus/Plus Query 20043 ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCG-----TTGTTGAAGAGTTA 20097 |||||||||||||||||| ||| | | ||| || | | || |||| || ||| Sbjct 85384 ATTTCCCTTATTAACTACTAAA-----AATGTGGCAATGAGAATAATTTTTGAGGAATTA 85438 Query 20098 TTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATT 20157 | |||||||| ||||| |||||| || | | |||| ||| ||| ||| Sbjct 85439 ATGTGGTTTATAAAAGGTGATACAAATGGTAATCACTTATTAGATAAAAAAGTATTTATT 85498 Query 20158 TGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAG 20217 ||| | ||||||| || | | ||| | | | ||| | | | || ||||| Sbjct 85499 TGGGCTGGTAATGGATCAAAAGAGTATTTGAATAAAATTGGTCTAGGTTATCGAGAAGAG 85558 Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || |||||||| | ||||| |||||||||||||||||| || |||||| ||| Sbjct 85559 AATGACTTGGGTCCAATATATGGTTTTCAATGGAGACATTTTAATGCAGAATATAA-GAC 85617 Query 20278 A-TGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 | || | |||||| ||| |||||||||||||||||| |||| | ||| | | | | Sbjct 85618 AATGCATGATAATTATAATGGGCAAGGAGTAGATCAATTATCAAATTTAATTGAATCACT 85677 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 ||| | || || | || |||||| ||| |||| || ||||| | | || Sbjct 85678 TAAGAAAAATCCTTATGATAGAAGACATATCTTATCTGCATGGAATCCATCTGCAATGAA 85737 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAAT 20451 | ||||| || || || |||||||| ||| |||||||| |||| ||||||| Sbjct 85738 ATATATGGCATTACCACCTTGTCATATATTATCTCAATTTTATGTTGATAATAAT 85792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183343217575