Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq73 84.2 2e-11 >seq73 Length=203464 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 ||||| ||||| |||||||| || || | ||||| ||||| || || | ||| || Sbjct 180933 ATTAATTATGCAGATTTTTGTGAAGACTTTAACGGGTAAAACAATAACACTTGAAGTTGA 180874 Query 115339 GTCCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397 ||| | || ||| ||| | | ||||| |||||| ||||||||||| | || Sbjct 180873 A-CCATCTGATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGGATTCCAC 180815 Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457 |||||| |||||| | |||| ||| || |||||| | || |||| || | | | Sbjct 180814 CTGATCAACAAAGATTAATTTTTGCTGGGAAACAACTTGAGGATGGTCGGACTTTATCTG 180755 Query 115458 ATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTT 115497 ||||||| ||||| || || || ||| | ||| | || || Sbjct 180754 ATTATAATATTCAGAAGGAATCAACTCTTCATTTAGTTTT 180715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343300176200