Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq54 95.1 3e-14 >seq54 Length=243407 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| |||||||| || | |||||||| | ||||| || |||||||| || |||||||| Sbjct 218158 AGTAGACTCCTTCTGAATATTGTAGTCTGATAAAGTTCTGCCATCTTCAAGTTGCTTTCC 218217 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 || ||||| | ||| || || || ||| ||||| || || || |||||| ||| Sbjct 218218 AGCAAAGATTAAACGTTGTTGATCTGGAGGTATTCCCTCCTTGTCTTGTATCTTTGCCTT 218277 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || ||| | || || | | ||| || || || || || || || || || | || Sbjct 218278 TACATTTTCAATTGTATCAGAAGGTTCAACTTCTAATGTAATAGTTTTCCCAGTTAAGGT 218337 Query 199612 TTTCACAAAAATTTG 199626 ||| ||||||||||| Sbjct 218338 TTTAACAAAAATTTG 218352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919560834045