Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq71 297 2e-74 seq72 219 3e-51 seq118 192 5e-43 seq73 134 1e-25 seq61 129 5e-24 seq96 127 2e-23 seq54 123 2e-22 seq79 104 2e-16 seq65 91.5 1e-12 >seq71 Length=86954 Score = 297 bits (328), Expect = 2e-74 Identities = 576/840 (69%), Gaps = 23/840 (3%) Strand=Plus/Plus Query 551757 GAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGAT 551816 ||||||||| |||| ||| || || ||| ||| | ||||||||||| ||||| Sbjct 9568 GAAGATGGTATCTTCGAAGTAAAGGCAACAGCTGGTGATACACATCTTGGTGGTGAAGAC 9627 Query 551817 TTTGATAATAGACTGGTATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAG---TT 551873 |||||||||||| | || || ||||| |||||||||| || || || | || Sbjct 9628 TTTGATAATAGATTAGTTGAATTCTGTGTCCAAGATTTTAAGCGTAAGAATCGTGGTCTT 9687 Query 551874 GATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAA 551933 ||| || |||| |||| ||| | | | ||||||| || ||| | || || Sbjct 9688 GATTTAACTACTAATGCCCGTGCTTTGAGAAGATTAAGAACCCAGTGTGAACGTGCAAAG 9747 Query 551934 CGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATT 551993 || | ||||| || ||| ||| | || || ||| | ||||| || || || || ||| Sbjct 9748 AGAACACTTTCTTCATCTACACAAGCAACAATCGAATTGGATTCTTTGTTCGAAGGTATT 9807 Query 551994 GATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGA 552053 || || | |||| | || | |||||| || ||||||||||| || | Sbjct 9808 GACTACTTTGTATCTATAAGTCGTGCAAGATTTGAGGAACTTTGTTCTGATTATTTCCGT 9867 Query 552054 AAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTA 552113 ||| | | |||||||| | || |||| |||||| || ||||| |||| Sbjct 9868 GGCACATTAGCTCCAGTAGAGAAGGTATTAAAAGATTCTGGAATGGATAAGAGGTCAGTA 9927 Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGT 552173 ||||| |||| | || ||||| || || | ||||| || | | || |||| | Sbjct 9928 CATGATGTTGTATTAGTAGGTGGTTCAACCCGTATTCCAAAGGTACAACAA---TTAA-T 9983 Query 552174 TC-----TTATTTCAATGGTAAAAAATTAAATGAAAGTG--TTAATCCAGATGAGGCTGT 552226 || || ||| |||||||| || | || ||| ||||||||||||| ||||| Sbjct 9984 TCAAGAATTCTTT-AATGGTAAGGAACCA--TGCAAGGCAATTAATCCAGATGAAGCTGT 10040 Query 552227 TGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA-ACTGATGAAAAACTAC 552285 ||| |||||||| ||| |||||||||| || | ||| || | | || | | | | Sbjct 10041 TGCTTATGGTGCTGCAGTTCAAGCAGCAATCTTAAATGGTGAACAGTCAT-CAGTAGTGC 10099 Query 552286 AAAA--TATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGG 552343 || | |||||| ||| |||||| |||| |||||| | ||||| ||||||| || || Sbjct 10100 AAGATTTATTGTTATTG--GATGTTGCTCCACTATCTTTAGGTTTGGAAACAGCAGGTGG 10157 Query 552344 TATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATT 552403 | ||||||| || ||||| || | |||||||| ||||| || ||| ||| ||||| Sbjct 10158 TGTTATGACAAAACTTATTGAACGTAATACTACCATTCCAGCAAAGAAAACTCAAGTATT 10217 Query 552404 TTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAA 552463 | || ||| | ||||| || | || ||| |||||| | |||||||| ||| | Sbjct 10218 CACAACATATGCTGATAACCAGAGTGGTGTACTTATTCAAGTATTTGAAGGTGAACGTGC 10277 Query 552464 ATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCC 552523 | | || ||||||||| | ||| |||| || ||||||| |||||||| || ||||| Sbjct 10278 AATGACAAAAGATAATCACTTACTAGGTAAATTCCATTTAGATGGTATTCCACCAGCTCC 10337 Query 552524 TCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 ||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 10338 ACGTGGTGTACCACAAATTGAAGTAACTTTTGATATTGATGCAAATGGCATTTTAAATGT 10397 Score = 284 bits (314), Expect = 1e-70 Identities = 399/555 (72%), Gaps = 15/555 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| ||||||||||| |||||| |||||||| || ||| | ||| | Sbjct 8943 AGCTGTTGGTATTGATTTAGGAACAACATATTCTTGTGTTGCCGTATGGAAGCATGATGC 9002 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||||||| | |||||||| ||||| ||||| || |||||||||||| | || || Sbjct 9003 TGTAGAAATTATTCCAAATGATCAGGGTAATAGAACAACCCCATCTTATGTTGCATTTAC 9062 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || | |||| |||| ||||||||||||| || |||| | || |||| || || Sbjct 9063 TGATTCCGAACGTTTAATTGGTGATGCAGCTAAGAATCAGGTTGCTCGTAACCCAGAAAA 9122 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 |||| | || |||||||||||||||||||| || | ||| ||||| ||||||| Sbjct 9123 TACTGTATTCGATGCTAAACGTTTAATTGGTAGGAAATTTGATGATCAAGCTGTTCAAAG 9182 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCT---GGAAAACCTTATATTGA 550287 || |||| |||||||| ||| | ||| | || | || | ||||| |||| | Sbjct 9183 TGACATGACACATTGGCCATTCAAGGTTGCTCGTGGTCCTAAAGATAAACCAATTATTAA 9242 Query 550288 AGCTACTCATGAAGGATCTGTTAAACA----ATTTTCA-CCAGAACAAATTTCATCTATG 550342 | ||| | || || ||||| | || || | ||| |||||||| ||||| Sbjct 9243 AATTACCTACTTAG-----GTGAAACAAAGGAATTCCATGCTGAAGAAATTTCAGCTATG 9297 Query 550343 GTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGC 550401 || ||| || ||||| | | | |||| ||||| |||| ||||| | |||| Sbjct 9298 GTCTTACAAAAGATGAAGGAGATTTCTGAAGCTTACCTTGGT-AAGACAGTTAAGAATGC 9356 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 ||| | || || || || ||||| ||||| ||||||||||||||||| || |||||||| Sbjct 9357 TGTAGTTACAGTTCCTGCCTATTTCAATGATTCACAACGTCAAGCTACAAAGGATGCTGG 9416 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 |||||||| | || ||| | |||||||| ||||||||||| |||||||| | || Sbjct 9417 TGCAATTGCTGGTTTGAACGTTATGCGTATTATTAATGAACCTACAGCTGCTGCTATAGC 9476 Query 550522 ATATGGACTTGATAA 550536 ||||| |||||||| Sbjct 9477 TTATGGTCTTGATAA 9491 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 361701 CAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTC 361760 ||||||||||||||| | ||||||||| ||||| ||||| || ||||| || | | Sbjct 9487 CAAGACCATAAGCTATAGCAGCAGCTGTAGGTTCATTAATAATACGCATAACGTTCAAAC 9428 Query 361761 CCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAA 361820 | || ||| ||||| || ||||||||||||| |||||| ||||| ||||||| Sbjct 9427 CAGCAATTGCACCAGCATCCTTTGTAGCTTGACGTTGTGAATCATTGAAATAGGCAGGAA 9368 Query 361821 CAGTAATCACTGCTTTTTCAACT 361843 | |||| || || || | |||| Sbjct 9367 CTGTAACTACAGCATTCTTAACT 9345 >seq72 Length=99648 Score = 219 bits (242), Expect = 3e-51 Identities = 388/562 (69%), Gaps = 19/562 (3%) Strand=Plus/Minus Query 552042 GATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGAT 552101 || || |||||| |||| || || || || || | ||||| | |||| || | || | Sbjct 23808 GACCTATTTAGACAAACTATGGAGCCTGTTAAAAAGGTTTTGAAAGATGCAGATATGAAG 23749 Query 552102 AAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGC 552161 ||||| | |||||||| ||||| | |||||||| ||||| | ||||||||||| | Sbjct 23748 AAATCTGATGTACATGAGATTGTCTTAGTTGGTGGTTCTACTCGTATTCCTAAAATCC-- 23691 Query 552162 GAAATGTTAAGTTCTTATTTCA---ATGGTAAAAAATTAAATGAAAGTGTTAATCCAGAT 552218 || |||| | ||||| |||| ||| || |||| | | ||||||| ||| Sbjct 23690 -AATCTTTAATTAAAGATTTCTTTGATGGGAAAGAACCAAATAGAGGAATTAATCCTGAT 23632 Query 552219 GAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAA 552278 |||||||| || |||||||| || ||||||| | ||||||| |||| || || | Sbjct 23631 GAGGCTGTAGCTTATGGTGCTGCTGTTCAAGCTGGTATTCTTGCTGGTGAAGGTGGT--- 23575 Query 552279 AAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTT 552338 || || | |||||| ||||||| |||||| || | | ||| | || |||||| Sbjct 23574 -AAGGACTTATTATTGT-----TAGATGTAACTCCTTTAACCTTAGGTATCGAGACAGTT 23521 Query 552339 GGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGT 552398 ||||| ||||||| || ||||| ||||||||| | ||||| || || | Sbjct 23520 GGAGGAGTTATGACAAAACTTATTCCTAGAAATACAGTTGTTCCTACGAAGAAGGGACAA 23461 Query 552399 GTATTTTC--TACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAG 552456 |||||| ||| | | |||||||||| | || || ||| ||| |||||||||| | Sbjct 23460 --ATTTTCAGTACTTCTCAAGATAATCAACCCGCAGTATTAATACAAGTTTTTGAAGGTG 23403 Query 552457 AAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTC 552516 || | | || |||||||||||| |||||| | ||| | ||| |||||||| | Sbjct 23402 AACGCTCCATGACAAAAGATAATAATTTACTTGGGAAATTTGAATTAACTGGTATTCCCC 23343 Query 552517 CTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTT 552576 | || ||| | || || || || || ||||||||||| || || ||| | |||| ||| Sbjct 23342 CAGCCCCTAGAGGTGTCCCTCAGATAGAAGTTACTTTTGAAATTGATACTGATGGTATTC 23283 Query 552577 TGAATGTGACTGCTTGTGATAA 552598 | | || | |||| ||||| Sbjct 23282 TTCAAGTCAGTGCTGAAGATAA 23261 Score = 214 bits (236), Expect = 1e-49 Identities = 385/559 (69%), Gaps = 8/559 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| ||||| ||| | || || || ||| ||||||| | | | ||||||| | Sbjct 24709 AGTTATTGGTATTGATCTTGGTACTACTTATTCATGTGTTGCTATCTATAAAAATGGAAG 24650 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||| || | |||||||||||||| || | |||||||| ||||| || || || Sbjct 24649 AGTTGAAATAATACCAAATGATCAAGGTAATAGGATAACTCCATCATATGTCTCATTTAC 24590 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| |||| | |||| || || || || ||||||| || |||||| | | Sbjct 24589 AGAAGATGAAAGGCTTATTGGAGAAGCTGCTAAGAATCAAGCTACAATTAATCCATCTCA 24530 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | ||||||| || | | |||||| | |||||| ||| || |||| Sbjct 24529 GACTTTATTTGATGTAAAGAGACTTATTGGACGTCGTTTTACAGATGACTCTATTCAAAA 24470 Query 550231 AGATATGAAG--CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 || | ||| | || |||| ||||| ||||| ||| |||||||| ||| || Sbjct 24469 GGACA--AAGTTCTTTTACCTTATGAAATTATTAATAAGAATGGCAAACCTTACATTAAA 24412 Query 550289 GCTAC--TCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 | | | ||| ||| || | |||||| || | || ||| | |||| ||||||| | Sbjct 24411 GTTGCTGTCAAGAATGAGACG--AAACAACTTGCCCCGGAAGAGGTTTCTGCTATGGTAT 24354 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 ||| |||||||| | | || |||| | |||| | ||||||| |||| || Sbjct 24353 TAACTAAAATGAAGGAGATTGCTGAGGCTTATCTTGGAAAGGAAGTTAAACATGCTGTTG 24294 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | ||||| |||||||| |||||||| | || | |||||||| |||||||| ||| || Sbjct 24293 TTACTGTTCCAGCATACTTTAATGATGCTCAGAGACAAGCTACAAAAGATGCAGGAGCTA 24234 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 |||| || || |||||| ||||||| || ||||| ||||| ||||| || | || | || Sbjct 24233 TTGCAGGTCTAAATGTTATTCGTATAATTAATGAGCCTACAGCTGCAGCTATAGCTTTTG 24174 Query 550527 GACTTGATAAACATAATGA 550545 | | |||||| | | ||| Sbjct 24173 GTTTAGATAAAAAGAGTGA 24155 Score = 123 bits (136), Expect = 2e-22 Identities = 210/300 (70%), Gaps = 17/300 (6%) Strand=Plus/Plus Query 361546 ATCTATATCTTCACCACCTAAATGTGTACTACCGCTAACTGCTA-ATGTTCTAAATAAGC 361604 ||| | ||||||||| || ||||| ||| ||| ||| ||| | | ||| ||||| | Sbjct 24028 ATCAAAATCTTCACCTCCCAAATGAGTATCACCACTAGTTGCAACAACTTC-AAATACTC 24086 Query 361605 CATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAA 361664 |||||| |||| | | ||| ||||||| | ||| || |||| |||||||| | | || Sbjct 24087 CATTATCAATAGTTAAAAGAGAAACATCAAATGTACCACCACCCAAATCATAAACCAAAA 24146 Query 361665 TATTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCAG 361724 || || || | | | || |||| || || |||| |||||| | |||| Sbjct 24147 TAGTC------TTCTCACTCTT------TTTA--TCTAA-ACCAAAAGCTATAGCTGCAG 24191 Query 361725 CTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAG 361784 |||| || || |||||||| ||||||||| || || || || | ||||||| | Sbjct 24192 CTGTAGGCTCATTAATTATACGAATAACATTTAGACCTGCAATAGCTCCTGCATCTTTTG 24251 Query 361785 TGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTTCAACTT 361844 | ||||| | || ||||||||||| ||||| |||||||||| || || | || ||||| Sbjct 24252 TAGCTTGTCTCTGAGCATCATTAAAGTATGCTGGAACAGTAACAACAGCATGTTTAACTT 24311 >seq118 Length=74726 Score = 192 bits (212), Expect = 5e-43 Identities = 265/367 (72%), Gaps = 18/367 (5%) Strand=Plus/Plus Query 368793 AGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATT 368852 |||||| ||||| |||||||||||||||||||||||||||| | || |||||||||| Sbjct 61612 AGTTTTTGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGCTTCTTTATATTATCCATT 61671 Query 368853 TGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATC 368912 | | || | | |||||| || | ||| || | || |||||||||| ||| Sbjct 61672 TAAAAATAAAGATTACTTTAATGA-GAT-----TTTTCCTGCAGATTTTGTAAGTGAAGG 61725 Query 368913 AATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGA 368972 | | ||||||||| | ||||||||||||||| || | | ||||| ||||| | || || Sbjct 61726 ATTGGATCAAACAAGGGGTTGGTTTTATACCTTAATGATTTTATCTACAGCATTATTTGA 61785 Query 368973 TAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGGTCAAAA 369032 ||| || |||||||||||| | || || | ||| ||||| ||||| |||||| |||| Sbjct 61786 TAAGCCAGCTTTTAAAAATCTTATTGTTAGTGGACTTGTTTTAGCATCAGATGGTAAAAA 61845 Query 369033 GATGTCAAAAAG---TAAGGGTAATTATTCCGATCCTAATATTTTAATTG---ATAAATT 369086 |||||||| || ||| |||||| | || | ||| | ||| |||||| Sbjct 61846 AATGTCAAAGAGACTTAA---AAATTATCCAGA---CACAATTGAAGTTGTCAATAAATA 61899 Query 369087 TGGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAATCTAT 369146 |||||||||| |||| |||||||| || | ||||| || |||| ||| || || | Sbjct 61900 TGGTGCTGATGCTTTAAGATTATATCTTATTAATTCACCAGTTGTAAGAGCTGAGACTTT 61959 Query 369147 TAAATTT 369153 | |||| Sbjct 61960 AAGATTT 61966 Score = 120 bits (132), Expect = 2e-21 Identities = 330/493 (67%), Gaps = 12/493 (2%) Strand=Plus/Plus Query 367267 GATGGACCTCCATTTGCCACAGG--TACAATGCATTATGGTCATATTTTAGTATCATCTA 367324 || || || |||||||| || || ||| | ||||||||||||||||||| ||| Sbjct 60152 GACGGTCCACCATTTGCAACCGGATTACCA--CATTATGGTCATATTTTAGCTGGTACTA 60209 Query 367325 TTAAAGACACCATAATTAGATATTTT-ACCATGAAGGGTTACAAAGTTGATAGAAGAAAT 367383 | || || | || | | ||||| | || |||| |||| | ||| || | | Sbjct 60210 TCAAGGATATAATTACTCGATATGCACAACAAAAAGG-TTACTATTGTGAAAGGCGTTTT 60268 Query 367384 TCTTGGGATTGTCATGGAGTTCCAATTGAAATGTTAGCTAAAAAAGTAATCGGATACACA 367443 ||||||||||||||| | || ||||| | | | | | || | || | ||| | Sbjct 60269 GGTTGGGATTGTCATGGTTTACCTGTTGAA-TATGAAATTGACAAATTATTGAATATATC 60327 Query 367444 ACAAAGAAAGAATTATATGATTATGGA-ATTAATAATCATAATGATATTTGTCGTAATTT 367502 | ||| | || || | ||||| ||| |||| ||||||| ||||| | | Sbjct 60328 AGGTAGAGATGATATAATTAATATGGGGATTGATAAGTATAATGAGTCATGTCGGGCTAT 60387 Query 367503 GGTTTTAAAATGTGCTGATCGCTGGTAT-CAAGATTTTGAACGTATTGGAAGATGGATTG 367561 || |||| || | |||| ||| ||| | | |||||| ||||||||||||||| Sbjct 60388 TGTATTAAGATATACTGAAAAGTGGAGGACAACAGTA-GAACGTGTTGGAAGATGGATTG 60446 Query 367562 ACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATTTGGGCAT 367621 | | | ||||| ||| ||||||||| || || ||| || |||| |||| || Sbjct 60447 ATTTTGATAATGATTATCGCACAATGGATCCTTCATTTATGCAAAGTGTTTGGTGGGTAT 60506 Query 367622 TTAAACAATTATACGAACGCGGTATGATTTTTGA-AGGTTATAAAGTAATGCCATATTCA 367680 ||||||||||||| || || || | | | | || |||| ||||||||||| || Sbjct 60507 TTAAACAATTATATGATAAAGG-ATTAGTATACAGAGCATATAGGGTAATGCCATACTCT 60565 Query 367681 ACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAACAAAATTATCGAGAAGTAGTT 367740 ||| ||||| ||| |||| ||| ||||||||||||| |||||| ||| ||| Sbjct 60566 ACTATTTGTAGTACACCTTTATCAAATTTTGAAGCCAATTTGAATTATAAAGATGTAAGC 60625 Query 367741 GATCCATCGATTA 367753 |||||||| |||| Sbjct 60626 GATCCATCTATTA 60638 >seq73 Length=203464 Score = 134 bits (148), Expect = 1e-25 Identities = 156/207 (75%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 563271 ATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG 563330 |||||| || ||| || |||||| ||||||| || ||| | ||| |||||||| Sbjct 180723 ATGAAGAGTTGATTCCTTCTGAATATTATAATCAGATAAAGTCCGACCATCCTCAAGTTG 180782 Query 563331 TTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390 ||| || |||||||| | |||||| |||||||| ||||| |||||||||||||||||||| Sbjct 180783 TTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGAATCCCTTCTTTATCTTGAATTTT 180842 Query 563391 TTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCA 563448 ||||| ||||| ||||||| || || || ||| || || | |||||||| Sbjct 180843 AGCCTTTACATTTTCAATAGTATCAG-ATG-GTTCAACTTCAAGTGTTATTGTTTTACCC 180900 Query 563449 GTAAGAGTTTTAACGAAAATTTGCATA 563475 || | ||| || || ||||| |||||| Sbjct 180901 GTTAAAGTCTTCACAAAAATCTGCATA 180927 >seq61 Length=587635 Score = 129 bits (142), Expect = 5e-24 Identities = 340/512 (66%), Gaps = 43/512 (8%) Strand=Plus/Plus Query 430220 TCAATATGAAATTCAGTTGAATATATATTCGCTAATTTTGCTCCGAATCCATTTTTACCA 430279 |||| | ||||||||||||| ||||||| | ||| || || || ||||||||| |||| Sbjct 102736 TCAACACAAAATTCAGTTGAAAATATATTTGTTAACTTAGCACCAAATCCATTTCTACCT 102795 Query 430280 CCAACAAtttttttttCACCTTTATCATAATTAGTGGATGTTAATAGTTCTCCAAAAATC 430339 || | | | | |||| | |||||||||| ||||||| || | ||||| || Sbjct 102796 CCTGTGACTCTATCTTCATTATCATCATAATTATCTGATGTTAGTAAGTGGCCAAATATT 102855 Query 430340 ATCGATGGTACCATGATTTTATGTTCTTTATGCTCGACGACATCAATACCATCACCATTA 430399 | |||||| | | || ||||||||| | ||| ||| ||||| |||| | Sbjct 102856 AATTCTGGTACATATACATCATATTCTTTATGTATTTCAACAGGAATCCCATCTCCATCA 102915 Query 430400 TTCCAAACACTAATT-TCTCCAGATTCTTCATTGATGTCGACTTTTAT-------CAT-- 430449 || ||| ||||||| ||| |||||| ||| || || |||||||| ||| Sbjct 102916 TTAAAAATACTAATTCTCTTATTATTCTT-ATTAATATCAACTTTTATACAGGTACATCT 102974 Query 430450 ---ATTA--CATGATTTGCATCT-TTTA---CTATGATCCGCTGAATTTACAAGAACTTC 430500 |||| ||| ||| |||| | || || ||| || | |||||| | || ||| Sbjct 102975 TTCATTATTCATCATTGAGATCTCTCTAGCCTTAACATCTGCGGCATTTACCAAAATTTC 103034 Query 430501 ATCATATATTTTATAAAGTCCTGGTACATAAGATATTTCTTTAAAAATTATTTGCGCATC 430560 |||| |||| || || | |||||| |||||| |||| |||| ||| Sbjct 103035 ATCAAATATCTTGTATAATCCTGGAACATAATTTATTAATTTA-----TAT--------- 103080 Query 430561 ACCCTCTTTAAATTTATT--ATTATATATCCACATATTACATGTT--TTATCTTCTATAC 430616 ||| |||| ||||||| || | | ||||| | | || | | || |||||||| Sbjct 103081 ACCATCTTATTATTTATTTCATCCCAAACCCACAAACT--TTGCTCATGATATTCTATAC 103138 Query 430617 TACCTATATAGGTATCGGGTGAATGTAATATATGTTCATGAAGAttctttttttgatatt 430676 |||||||||| ||||| || ||| ||||||||| || | ||||||||||| Sbjct 103139 TACCTATATATGTATCAGGACGCAATAAAATATGTTCAATTTGAGTTTTTTTTTGATAAC 103198 Query 430677 tttcttcgattgtcttttcagaactttttttc 430708 |||||| | ||||| || ||||||||| Sbjct 103199 GTTCTTCAACCGTCTT---AGCCCTTTTTTTC 103227 Score = 105 bits (116), Expect = 5e-17 Identities = 249/376 (66%), Gaps = 20/376 (5%) Strand=Plus/Plus Query 1047046 ATTGCTGATTGGTTTGCACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGA 1047105 ||||||||||||||||||| ||||| |||| ||||| |||||| |||| || || | Sbjct 233543 ATTGCTGATTGGTTTGCACTTTTGAATAATAAGATGGGTGGTGATCTAGAGAAGATACAA 233602 Query 1047106 GATGTGGGTAAATATTTCATTGAAGTATTTAAAGCATGTGGTATTAATATGTCTGGCACT 1047165 ||| || || || || ||||| || | | || |||||| ||||| || Sbjct 233603 ACTGTAGGGAAGTACTTTATTGAGGTTTGGAGGGCTACTGGTATGGATATGACTAATGTG 233662 Query 1047166 AAATTTATCTGGGCTAGTGAATTTTTTAATGATAATGCTACAAAATATTTTGAAAGAATG 1047225 | |||| | |||||| ||| | | | ||||| | || | | || ||| | Sbjct 233663 AGATTTTTGTGGGCTTCTGATGAGATAAGTAATAATTCAACTTACTGGCTT---AGAGTT 233719 Query 1047226 TTACATATTGCTA----ATCAGACATCTTTAGCACGTGCTAAAAGATGTTGTCAAATTAT 1047281 || |||| ||| || | || | ||| | |||||||||||| |||||||| Sbjct 233720 ATAGATATATCTAGAAAATTCAATATATCTAGGAT----TAAAAGATGTTGCCAAATTAT 233775 Query 1047282 GGGACGTAGAGAAGGTGATGAATTATCTTCGTCACAAATTATATATCCTTGTATGCAAGT 1047341 |||| | |||| ||||||| | ||| || | |||| || ||||||||| Sbjct 233776 GGGAAGGCAAGAAAGTGATGATCAACCTTGTGCAGCTGTATTATACCCATGTATGCAATG 233835 Query 1047342 AGCAGATATTTTTGAATTAAATCCAAATGGAATTGATATTTGTCAACTTGGTGTTGATCA 1047401 || ||||||||| | ||||| | ||||||||| ||| | ||| | ||||| Sbjct 233836 TGCTGATATTTTTCACTTAAAAGC---------TGATATTTGCCAATTAGGTATGGATCA 233886 Query 1047402 AAGAAAAGTTAATATG 1047417 |||||| ||||||||| Sbjct 233887 AAGAAAGGTTAATATG 233902 >seq96 Length=258070 Score = 127 bits (140), Expect = 2e-23 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723 ||||||| |||||||||||||| || ||||| ||||| | || || | |||||||| | Sbjct 16873 TTGATTTCTCTTCACCAAATATAGCAAAAGAGATGCACGTAGGTCACCTACGTTCTACAA 16814 Query 930724 TTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTCA 930783 ||||||| || | | ||| | ||| |||||||| ||| | |||| | ||| | | Sbjct 16813 TTATTGGGGATACAATTTGTCGTATATTTGAATATTTAGGATATGAAGTACTTCGCATAA 16754 Query 930784 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTATATA 930833 ||||| |||| |||||||||||||||||||| ||| | |||| ||| || Sbjct 16753 ATCATGTTGGAGATTGGGGAACACAATTTGGAATGCTCATTGAATATTTA 16704 >seq54 Length=243407 Score = 123 bits (136), Expect = 2e-22 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| || | || |||||| |||||||||||| ||||| ||||| || | | Sbjct 218173 AATATTGTAGTCTGATAAAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACG 218232 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||| ||||| ||||| ||||| || || ||||| || ||| ||||| |||||||| Sbjct 218233 TTGTTGATCTGGAGGTATTCCCTCCTTGTCTTGTATCTTTGCCTTTACATTTTCAATTGT 218292 Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 ||||| | | ||| | |||| |||||| ||||| | |||||||| |||||||| Sbjct 218293 ATCAGAAGGTTCAACTTCTAATGTAATAGTTTTCCCAGTTAAGGTTTTAACAAAAATTTG 218352 Query 563472 CAT 563474 ||| Sbjct 218353 CAT 218355 >seq79 Length=147675 Score = 104 bits (114), Expect = 2e-16 Identities = 254/374 (68%), Gaps = 12/374 (3%) Strand=Plus/Plus Query 344266 ACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTA-ACTTCCATTCT 344324 ||||| ||||| | ||||||||||| ||||| || || || ||| | ||| ||| | Sbjct 55962 ACCATGTGTTTTAAGCGTTGATAATAGGTTGGGCCTATAAAAATTCGAGACTCTAATTGT 56021 Query 344325 TTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGC--TTCATGTCCTAAAGCT 344382 | ||| || ||||||||||| ||||||||| || | || | || ||| Sbjct 56022 CT-TCCAGTATGCCCATTATACATAACTTCATTTCC--ATTCCTTTGAAAACCAGCAGCA 56078 Query 344383 ACTAAATCATCATTAAT-TTTATT-AATATTAACTCCTGTAAATGGAGTTGCATCTCCAT 344440 ||| || || || ||| || || | | ||| ||| || || || ||||| || | Sbjct 56079 TGTAACCTAT--TTGATATTTCTTCAACAGTGACTTTTGTGAAAGGTGTAGCATCACCTT 56136 Query 344441 ATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGACCTATCGTCA 344500 | |||| ||| |||||| ||||| |||| ||||||||| | || || || |||| Sbjct 56137 CCATGCCTTCAATAGCACAAGTCTTACCGAGTATACATTCAATAAGATGCCCAATAGTCA 56196 Query 344501 TACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTAATCCTGATTTTGTGA 344560 | | | || ||| || |||||| ||||| ||||| || | || || || || | Sbjct 56197 TTCTTGAAGGAATAGCATGAGGATTCATAATTATATCTGGTACTATCCCATCTTGAGTAA 56256 Query 344561 ATGGAAGATCTGCACGATGAATTTTAAATCC-AACTGTTCCTTTTTGTCCAGCTCTTGAT 344619 |||| | |||| | | | || | ||||| || ||| ||||| || ||| |||||| Sbjct 56257 ATGGCATATCTTC-CATTCTATATGTAATCCCAATTGTACCTTTCTGGCCATGTCTTGAA 56315 Query 344620 GAGAATTTATCACC 344633 | |||||||||||| Sbjct 56316 GCGAATTTATCACC 56329 >seq65 Length=160932 Score = 91.5 bits (100), Expect = 1e-12 Identities = 203/301 (67%), Gaps = 4/301 (1%) Strand=Plus/Plus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGG--TATTATGACTAATCTTA 552360 ||||| || ||| |||| || || | ||||| |||| || |||| | | || | | Sbjct 20835 GATGTGACACCTTTATCACTGGGAATTGAAACTCTTGGTGGAGTATT-TACCCGAT-TGA 20892 Query 552361 TCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATA 552420 | | |||||||||||||||| || ||| || || |||||||| | | || | Sbjct 20893 TTAACCGAAATACTACTATTCCAACAAAGAAAAGTCAGGTGTTTTCTACTGCTGCTGACA 20952 Query 552421 ATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATA 552480 |||||||| || || | | ||| ||||||| ||| || | | | ||||| | Sbjct 20953 ATCAAACTCAAGTAGGTATAAATGTATTTCAAGGAGAGAGAGAAATAGCAATGGATAACA 21012 Query 552481 ATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAA 552540 | | || ||| || ||||| |||||||| || || || | || || || |||| Sbjct 21013 AACTGCTGGGTCAATTCGATTTAATGGGTATTCCCCCAGCCCCAAGAGGTGTCCCTCAAA 21072 Query 552541 TTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAAT 552600 | || || || |||||||| ||||| ||||| ||| ||||||| | || ||||||| Sbjct 21073 TAGAGGTGACATTCGATATAGATGCTAATGGTATTATGAATGTAAGCGCAGTAGATAAAT 21132 Query 552601 C 552601 | Sbjct 21133 C 21133 Score = 86.0 bits (94), Expect = 5e-11 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 ||||||||||||||||| || | | || | ||| | | |||||||||||| Sbjct 20037 AAAATGAAACAAACAGCAGAAGCATACTTAGGACGTACAGTAAAACAAGCAGTAATAACT 20096 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || || || || |||||||| || ||||| ||||| || || |||||||| || || Sbjct 20097 GTGCCTGCTTACTTTAATGATTCTCAACGACAAGCAACAAAGGATGCTGGTAAAATAGCA 20156 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 ||| | |||| | | ||||| ||||| || |||||||| || | || | |||| | Sbjct 20157 GGATTAGATGTCTTAAGAATTATAAATGAGCCAACTGCTGCAGCTTTGGCTTTTGGAATG 20216 Query 550532 GATAA 550536 || || Sbjct 20217 GACAA 20221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029288860591150