Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq71 334 5e-86 seq72 282 3e-70 seq118 197 9e-45 seq54 149 4e-30 seq73 132 3e-25 seq96 129 4e-24 seq65 114 8e-20 seq79 107 1e-17 seq61 100 2e-15 seq42 95.1 8e-14 >seq71 Length=86954 Score = 334 bits (370), Expect = 5e-86 Identities = 662/965 (69%), Gaps = 25/965 (3%) Strand=Plus/Plus Query 475318 TGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGA 475377 ||| ||| | ||||| | | ||||||||| | ||| |||| ||||||||||| || Sbjct 9546 TGATGTATCATTACTTACTATTGAAGATGGTATCTTCGAAGTAAAGGCAACAGCTGGTGA 9605 Query 475378 TTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTTGAAGATTT 475437 | ||||||||||||||||||| |||||||||||| | || || ||||| ||||||| Sbjct 9606 TACACATCTTGGTGGTGAAGACTTTGATAATAGATTAGTTGAATTCTGTGTCCAAGATTT 9665 Query 475438 CAAGAGGAAAAATAAAG---TTGATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAG 475494 ||| | || ||| | ||||| | | || ||| || || ||| | | || Sbjct 9666 TAAGCGTAAGAATCGTGGTCTTGATTTAACTACTAATGCCCGTGCTTTGAGAAGATTAAG 9725 Query 475495 AACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGT 475554 ||| ||||||||||| ||| || | |||||||| |||| ||| | || | ||| | Sbjct 9726 AACCCAGTGTGAACGTGCAAAGAGAACACTTTCTTCATCTACACAAGCAACAATCGAATT 9785 Query 475555 TGATTCTCTTTTTGAAGGAATTGATTA--TAATACTCTTATTACAAGGGCTAAATTTGAA 475612 |||||| | || ||||| ||||| || | || ||| || | | || | |||||| Sbjct 9786 GGATTCTTTGTTCGAAGGTATTGACTACTTTGTA-TCT-ATAAGTCGTGCAAGATTTGAG 9843 Query 475613 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGAT 475672 || ||||||||||| || | ||| | | || || || | || | | |||| Sbjct 9844 GAACTTTGTTCTGATTATTTCCGTGGCACATTAGCTCCAGTAGAGAAGGTATTAAAAGAT 9903 Query 475673 TCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATT 475732 ||| | | || || ||| ||||| |||| | ||||| |||||||| | ||| Sbjct 9904 TCTGGAATGGATAAGAGGTCAGTACATGATGTTGTATTAGTAGGTGGTTCAACCCGTATT 9963 Query 475733 CCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTA 475792 ||||| || | || | || | || ||||||||||| | | || ||| | Sbjct 9964 CCAAAGGTACAACAATTAATTCAAGAATTCTTTAATGGTAAGGAACCA--TGCAAGGCAA 10021 Query 475793 --AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTC 475850 ||||| |||||||||||||| ||||| ||||| || |||||||| || ||| ||| Sbjct 10022 TTAATCCAGATGAAGCTGTTGCTTATGGTGCTGCAGTTCAAGCAGCAATCTTAAATGGTG 10081 Query 475851 AATCAGACG--AGAAACTAAATAAT-ATTGTACTTGTTGACGTAACTCCACTTTCATTAG 475907 || ||| | || | || | | ||||| ||| || || ||||||| || |||| Sbjct 10082 AA-CAGTCATCAGTAGTGCAAGATTTATTGTTATTG--GATGTTGCTCCACTATCTTTAG 10138 Query 475908 GTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCAT 475967 || | ||||||| || || ||||||| || |||||||| | |||||| | || ||| Sbjct 10139 GTTTGGAAACAGCAGGTGGTGTTATGACAAAACTTATTGAACGTAATACTACCATTCCA- 10197 Query 475968 GCAAA-AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAA 476026 ||||| ||| | ||||||| | || ||| ||||||| || | |||| || ||| Sbjct 10198 GCAAAGAAAACTCAAGTATTCACAACATATGCTGATAACCAGAGTGGTGTACTTATTCAA 10257 Query 476027 ATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTT 476086 | |||||||||||| | | | || ||||||||| || ||| || | || || | Sbjct 10258 GTATTTGAAGGTGAACGTGCAATGACAAAAGATAATCACTTACTAGGTAAATTCCATTTA 10317 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 || |||||||| || ||||| | || || || ||||||||||| ||||||||||||||| Sbjct 10318 GATGGTATTCCACCAGCTCCACGTGGTGTACCACAAATTGAAGTAACTTTTGATATTGAT 10377 Query 476147 GCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAAC---AAGAGTAAAAAT 476203 |||||||| ||| | ||||| | || ||| || |||| | ||||| | || Sbjct 10378 GCAAATGGCATTTTAAATGTATCAGCAGTTGACAA---GAGTACCGGTAAGAGCAGCAAG 10434 Query 476204 ATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGAT 476263 || || ||||| || || ||| | || | | ||| | ||| ||||||||||| || Sbjct 10435 ATTACGATTACTAATGATAAAGGTCGTTTATCAAAGGAAGATATTGAACGTATGGTTAAT 10494 Query 476264 GAAGC 476268 || || Sbjct 10495 GATGC 10499 Score = 295 bits (326), Expect = 4e-74 Identities = 432/602 (72%), Gaps = 22/602 (4%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 ||||||||||||||||||| || || |||||| || || ||| | ||| | |||| Sbjct 8948 TTGGTATTGATTTAGGAACAACATATTCTTGTGTTGCCGTATGGAAGCATGATGCTGTAG 9007 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| ||| | ||||| || |||||||||||||| ||||| |||||| | |||||||| Sbjct 9008 AAATTATTCCAAATGATCAGGGTAATAGAACAACCCCATCTTATGTTGCATTTACTGATT 9067 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | |||| | | ||||| ||||| ||||| |||| | ||| ||| || | |||||| Sbjct 9068 CCGAACGTTTAATTGGTGATGCAGCTAAGAATCAGGTTGCTCGTAACCCAGAAAATACTG 9127 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | || ||||||||| | || |||||| | || ||||||||| |||| ||| ||| | Sbjct 9128 TATTCGATGCTAAACGTTTAATTGGTAGGAAATTTGATGATCAAGCTGTTCAAAGTGACA 9187 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGT---GGTAAACCATATATAGAAGCAA 474629 || |||||||| || ||||| || | | | ||||||| ||| || | Sbjct 9188 TGACACATTGGCCATTCAAGGTTGCTCGTGGTCCTAAAGATAAACCAATTATTAAA--AT 9245 Query 474630 TAC--ACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 ||| || ||||||||| || |||| | ||| ||||||| | ||||| ||| Sbjct 9246 TACCTACTTAGGTGAAACAAAGGAATTCCATGCTGAAGAAATTTCAGCTATGGTCTTACA 9305 Query 474688 CAAAATGAAACAAACCGCG--AGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAAT 474744 || ||||| | | | |||| || ||||| |||| ||| | |||| ||| | Sbjct 9306 AAAGATGAAGGAGATTTCTGAAGCT--TACCTTGGT-AAGACAGTTAAGAATGCTGTAGT 9362 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||| ||||| || ||||| |||||||| ||||||||||| || || ||||| || ||| Sbjct 9363 TACAGTTCCTGCCTATTTCAATGATTCACAACGTCAAGCTACAAAGGATGCTGGTGCAAT 9422 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||| | || ||| | ||||||||||||||||| ||||| || || | |||||||| Sbjct 9423 TGCTGGTTTGAACGTTATGCGTATTATTAATGAACCTACAGCTGCTGCTATAGCTTATGG 9482 Query 474865 TCTTGATAAGAA---TTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGG 474918 |||||||||||| | ||| ||| |||||| || ||||| |||| |||| || Sbjct 9483 TCTTGATAAGAAAGGTACTG---GTGAAAGAAATGTCTTGATCTTCGATTTAGGTGGTGG 9539 Query 474919 TA 474920 || Sbjct 9540 TA 9541 Score = 104 bits (114), Expect = 2e-16 Identities = 243/359 (68%), Gaps = 12/359 (3%) Strand=Plus/Minus Query 330936 AAAATT-ATATAAAATATGACATGGAGGAAGTGCCATTTTATTAATATCCACTGGATTCC 330994 |||||| | |||| |||||||| || || | |||||| | || || | |||||||| Sbjct 85778 AAAATTGAGATAATATATGACAAGGTGGTAATGCCATATATTTCATTGCAGATGGATTCC 85719 Query 330995 ATAAATTAATAATAATTCTTCTATCTGTCGGATTATTTTTAATTGCTTCGATACAttttt 331054 || | | ||| ||||||||| ||||| || |||| || ||| || | ||| Sbjct 85718 ATGCAGATAAGATATGTCTTCTATCATAAGGATTTTTCTTAAGTGATTCAATTAAATTTG 85659 Query 331055 ttAATTGATCAATTCCTTGCCCGCTGTAATCTTTTTTACAATTT-TCATATGTTGCACCA 331113 ||||||||| | ||||||||| | |||| | | | || | | | |||| |||| | Sbjct 85658 ATAATTGATCTACTCCTTGCCCATTATAAT-TATCATGCATTGTCTTATATTCTGCATTA 85600 Query 331114 AAATATCTCATTTGGAAACCATATCCAGGACCTATATCACCTACATC---ATAATCCAGA 331170 |||| |||| ||| ||||||||| ||||| | ||| | || |||| | ||| Sbjct 85599 AAATGTCTCCATTGAAAACCATATATTGGACCCAAGTCATTCTCTTCTCGATAACCTAGA 85540 Query 331171 CCATTTTTATCTAAAAAATCACGTGATGAATTTTTATCCCAAATATGAACACCGGCTTTT 331230 ||| |||||| ||| | || |||| ||| | |||||||| || || ||| Sbjct 85539 CCAATTTTATTCAAATACTCTTTTGATCCATTACCAGCCCAAATA--AATACTTT-TTTA 85483 Query 331231 TGTAAAAC---ATTAACATCAGTACTGCCTCTTATCATCCACATTAATTCTTCAAATAT 331286 | ||| | |||| ||| ||| ||| |||| | |||||||||||| ||||| || Sbjct 85482 TCTAATAAGTGATTACCATTTGTATCACCTTTTATAAACCACATTAATTCCTCAAAAAT 85424 >seq72 Length=99648 Score = 282 bits (312), Expect = 3e-70 Identities = 394/548 (72%), Gaps = 6/548 (1%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||||||| | || |||||||| ||||| ||| | | ||||||| | ||| Sbjct 24705 ATTGGTATTGATCTTGGTACTACTTATTCATGTGTTGCTATCTATAAAAATGGAAGAGTT 24646 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 |||||||| | ||||| ||||||||||| | ||| ||||||||||| || ||||| ||| Sbjct 24645 GAAATAATACCAAATGATCAAGGTAATAGGATAACTCCATCATATGTCTCATTTACAGAA 24586 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 |||| ||||||||||| |||||||| |||||||| || |||||| | | ||| Sbjct 24585 GATGAAAGGCTTATTGGAGAAGCTGCTAAGAATCAAGCTACAATTAATCCATCTCAGACT 24526 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | ||||||| || ||| | ||||| ||| |||| ||| | || | ||| || Sbjct 24525 TTATTTGATGTAAAGAGACTTATTGGACGTCGTTTTACAGATGACTCTATTCAAAAGGAC 24466 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATA 474631 | || || |||| | | | || ||| ||| ||||| || || ||| | Sbjct 24465 AAAGTTCTTTTACCTTATGAAATTATTAATAAGAATGGCAAACCTTACATTAAAGT--TG 24408 Query 474632 CACGCAGG--TGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | ||| || |||||| || | |||||| | ||||| | ||||| ||| | | Sbjct 24407 CTGTCAAGAATGAGACGAAACAACTTGCCCCGGAAGAGGTTTCTGCTATGGTATTAACTA 24348 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 ||||||| | | || ||| | ||||||||| | ||||| | |||| || ||||| Sbjct 24347 AAATGAAGGAGATTGCTGAGG-CTTATCTTGGAAAGGAAGTTAAACATGCTGTTGTTACT 24289 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||||||||| ||||||||| |||| | ||||| || |||||||| ||| |||||| Sbjct 24288 GTTCCAGCATACTTTAATGATGCTCAGAGACAAGCTACAAAAGATGCAGGAGCTATTGCA 24229 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 ||||| |||||| | ||||| |||||||| || ||||| || || | |||| |||| | Sbjct 24228 GGTCTAAATGTTATTCGTATAATTAATGAGCCTACAGCTGCAGCTATAGCTTTTGGTTTA 24169 Query 474869 GATAAGAA 474876 ||||| || Sbjct 24168 GATAAAAA 24161 Score = 188 bits (208), Expect = 5e-42 Identities = 459/687 (67%), Gaps = 25/687 (4%) Strand=Plus/Minus Query 475601 GCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAA 475660 ||||| ||||| || | | | || || |||||| |||| || || || ||| || | Sbjct 23832 GCTAAGTTTGAGGAATTAAATGCAGACCTATTTAGACAAACTATGGAGCCTGTTAAAAAG 23773 Query 475661 GTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGT 475720 ||| | | |||| | | | | ||||| | || ||||| ||||| | || || ||| Sbjct 23772 GTTTTGAAAGATGCAGATATGAAGAAATCTGATGTACATGAGATTGTCTTAGTTGGTGGT 23713 Query 475721 TCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT-----TTTAATGGTAAAA 475775 || || | ||||| ||||| ||| |||| || | | ||| |||| ||| Sbjct 23712 TCTACTCGTATTCCTAAAATCC----AAT-CTTTAATTAAAGATTTCTTTGATGGGAAAG 23658 Query 475776 AGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 | |||| | | | ||||||||||| ||||| || ||||| |||||||| ||||| | Sbjct 23657 AACCAAATAGAGGAATTAATCCTGATGAGGCTGTAGCTTATGGTGCTGCTGTTCAAGCTG 23598 Query 475836 CTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 |||| | | ||| || | | || | || |||||| | || ||||||| Sbjct 23597 GTATTCTTGCTGGTGAAGGTG----GTAAGGACTTATTATTGT-----TAGATGTAACTC 23547 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 | | | |||||| | || ||||||||||| ||||||| || |||||| ||||||| Sbjct 23546 CTTTAACCTTAGGTATCGAGACAGTTGGAGGAGTTATGACAAAACTTATTCCTAGAAATA 23487 Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTC--CACTTATTCTGATAATCAAACAAC 476013 | | | || | | || || | | |||||| |||| | ||||||||| | | Sbjct 23486 CAGTTGTTCC-TACGAAGAAGGGACA-AATTTTCAGTACTTCTCAAGATAATCAACCCGC 23429 Query 476014 TGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTT-G 476072 ||| || ||| | |||||||||||| | | || ||||||||||| |||| | Sbjct 23428 AGTATTAATACAAGTTTTTGAAGGTGAACGCTCCATGACAAAAGATAATAATTTACTTGG 23369 Query 476073 GAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 ||| ||| ||| | |||||||| || || || ||||| || ||||| || ||||||| Sbjct 23368 GAAATTTGAAT-TAACTGGTATTCCCCCAGCCCCTAGAGGTGTCCCTCAGATAGAAGTTA 23310 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACA 476192 ||||||| |||||| | ||||||||||| | || | |||| ||||| || | | Sbjct 23309 CTTTTGAAATTGATACTGATGGTATTCTTCAAGTCAGTGCTGAAGATAAGGGTACTGGGA 23250 Query 476193 AGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAAC 476252 | | | || || ||||| || || || | | | | || ||||| | ||| ||| Sbjct 23249 AATCTGAGAAAATTACTATCACTAATGATAAAGATCGTCTATCTCAAGAAGATATTGAAC 23190 Query 476253 GTATGGTTGATGAAGCCAAAGAGTTTG 476279 ||||| || | ||||| || | |||| Sbjct 23189 GTATGATTAAAGAAGCTGAACAATTTG 23163 >seq118 Length=74726 Score = 197 bits (218), Expect = 9e-45 Identities = 261/354 (74%), Gaps = 20/354 (6%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 ||||| |||||||||||||||||||||||||||||||||| | | ||||||| ||| Sbjct 61613 GTTTTTGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGCTTCTTTATATTATCCATTT 61672 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATAT-TGCAGATTTTATAACAGAATC 297440 ||||| ||| ||| || | ||||| | |||||||||| ||| ||| Sbjct 61673 AAAAAT----AAAGATTACT---TTAATGAGATTTTTCCTGCAGATTTTGTAAGTGAAGG 61725 Query 297441 AATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAA 297500 | | ||||||||||| |||||||||||||| ||| | || | |||||||| ||||| | Sbjct 61726 ATTGGATCAAACAAGGGGTTGGTTTTATACCTTAATGATTTTATCTACAGCATTATTTGA 61785 Query 297501 CAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAA 297560 || ||||| ||||||||| | ||||||| ||| ||||| ||| | ||||| |||| Sbjct 61786 TAAGCCAGCTTTTAAAAATCTTATTGTTAGTGGACTTGTTTTAGCATCAGATGGTAAAAA 61845 Query 297561 AATGTCAAAAAG---TAAAGGTAATTATCCTGATCCAAAT-ATTTTGATGGATAAATATG 297616 ||||||||| || |||| |||||||| || ||| | | ||| | ||||||||| Sbjct 61846 AATGTCAAAGAGACTTAAA---AATTATCCAGACACAATTGAAGTTG-TCAATAAATATG 61901 Query 297617 GTGCAGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGa 297668 |||| ||| ||||| | |||| | |||| || |||| || || | ||| || Sbjct 61902 GTGCTGATGCTTTAAG--ATTATATCTTATTAATTCACCAGTTGTAAGAGCTGA 61953 Score = 156 bits (172), Expect = 3e-32 Identities = 342/499 (69%), Gaps = 24/499 (5%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 || || || |||||||| || ||| || | |||||||| |||||||||| |||| Sbjct 60152 GACGGTCCACCATTTGCAACCGGATTACCA--CATTATGGTCATATTTTAGCTGGTACTA 60209 Query 295853 TTAAAGATACCATGACTAGATATTTA--ACAATGAATGGTTATCAAGTTAATATGGGAAT 295910 | || |||| || ||| ||||| | |||| || ||||| | | | | | | | Sbjct 60210 TCAAGGATATAATTACTCGATATGCACAACAA--AAAGGTTACTATTGTGAAAGGCGTTT 60267 Query 295911 TGGTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGAT 295966 |||||||||||| ||||| | || ||||| ||| ||| | ||| ||| | || Sbjct 60268 TGGTTGGGATTGTCATGGTTTACCTGTTGAATATGAAATTGAC-----AAATTATTGAAT 60322 Query 295967 ATATCACAAAGAAA-GATTTATTGGAATACGGT-ATTGATCGTCATAATGATATTTGTCG 296024 |||||| ||| | ||| || | |||| || |||||| ||||||| ||||| Sbjct 60323 ATATCAGGTAGAGATGATATAATT-AATATGGGGATTGATAAGTATAATGAGTCATGTCG 60381 Query 296025 TGATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATG 296084 | ||| ||||||| || |||||| || ||| | | || | |||||||||| Sbjct 60382 GGCTATTGTATTAAGATATACTGAAAAGTGGAGGACAACAGTAGAACGTGTTGGAAGATG 60441 Query 296085 GATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTG 296144 ||||||| || ||||||| ||| ||||||||| |||||| || |||| || Sbjct 60442 GATTGATTTTGATAATGATTATCGCACAATGGATCCTTCATTTATGCAAAGTGTTTGGTG 60501 Query 296145 GTCATTTAAACAACTTTATGA-AAAGGAAATGATTTTTGA-AGGTTATAAAGTTATGCCT 296202 | |||||||||| | ||||| ||||| || | | | | || |||| || ||||| Sbjct 60502 GGTATTTAAACAATTATATGATAAAGG--ATTAGTATACAGAGCATATAGGGTAATGCCA 60559 Query 296203 TATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAG 296262 || |||||| ||| | |||||| ||||| ||||||| || || ||||||||||| Sbjct 60560 TACTCTACTATTTGTAGTACACCTTTATCAAATTTTGAAGCCAATTTGAATTATAAAGAT 60619 Query 296263 ATTATTGATCCATCTGTTA 296281 | | ||||||||| ||| Sbjct 60620 GTAAGCGATCCATCTATTA 60638 >seq54 Length=243407 Score = 149 bits (164), Expect = 4e-30 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || ||| || || | || ||||||| |||||||||||||||||||||||| || | ||| Sbjct 218173 AATATTGTAGTCTGATAAAGTTCTGCCATCTTCAAGTTGCTTTCCAGCAAAGATTAAACG 218232 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 ||||||||| ||||| ||||| ||||||||||| |||||| || ||| |||||| || Sbjct 218233 TTGTTGATCTGGAGGTATTCCCTCCTTGTCTTGTATCTTTGCCTTTACATTTTCAATTGT 218292 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || | ||| | ||||||||||| || || | || ||||| |||||||| Sbjct 218293 ATCAGAAGGTTCAACTTCTAATGTAATAGTTTTCCCAGTTAAGGTTTTAACAAAAATTTG 218352 >seq73 Length=203464 Score = 132 bits (146), Expect = 3e-25 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 480569 ATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTG 480628 |||||| || ||| || || ||||||||||| || ||| | ||| |||||||| Sbjct 180723 ATGAAGAGTTGATTCCTTCTGAATATTATAATCAGATAAAGTCCGACCATCCTCAAGTTG 180782 Query 480629 CTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTT 480688 || ||||||||||| | | |||||||||||| ||||| ||||| || |||||||| || Sbjct 180783 TTTCCCAGCAAAAATTAATCTTTGTTGATCAGGTGGAATCCCTTCTTTATCTTGAATTTT 180842 Query 480689 TTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGT 480748 || ||| |||||||||||||| || | |||||| || || |||||||| || Sbjct 180843 AGCCTTTACATTTTCAATAGTATCAGATGGTTCAACTTCAAGTGTTATTGTTTTACCCGT 180902 Query 480749 GAGAGTCTTAACGAAAATTTG 480769 | |||||| || ||||| || Sbjct 180903 TAAAGTCTTCACAAAAATCTG 180923 >seq96 Length=258070 Score = 129 bits (142), Expect = 4e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 ||||| || || |||||||| ||||| || ||||| | || ||| | | |||||||| Sbjct 16871 GATTTCTCTTCACCAAATATAGCAAAAGAGATGCACGTAGGTCACCTACGTTCTACAATT 16812 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 ||||| || | ||||| | |||| ||||| || |||| |||||||| | |||||| Sbjct 16811 ATTGGGGATACAATTTGTCGTATATTTGAATATTTAGGATATGAAGTACTTCGCATAAAT 16752 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 ||| |||| |||||||||||||||||||| ||| | |||| ||| Sbjct 16751 CATGTTGGAGATTGGGGAACACAATTTGGAATGCTCATTGAATA 16708 >seq65 Length=160932 Score = 114 bits (126), Expect = 8e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 474689 AAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 |||||||||||||| || |||| | |||| ||||| | |||||||| ||| Sbjct 20037 AAAATGAAACAAACAGCAGAAGCATACTTAGGACGTACAGTAAAACAAGCAGTAATAACT 20096 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || || || || ||||||||||||||||| |||||||| || ||||| || | ||| ||| Sbjct 20097 GTGCCTGCTTACTTTAATGATTCTCAACGACAAGCAACAAAGGATGCTGGTAAAATAGCA 20156 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || | |||| ||| | ||||| ||||| ||||| || || || | |||| ||| Sbjct 20157 GGATTAGATGTCTTAAGAATTATAAATGAGCCAACTGCTGCAGCTTTGGCTTTTGG 20212 Score = 95.1 bits (104), Expect = 8e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 290843 GCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAATCT 290902 || || ||||| ||||||||||||||||| ||||| | ||||| ||||| | | ||| Sbjct 20197 GCAGCAGTTGGCTCATTTATAATTCTTAAGACATCTAATCCTGCTATTTTACCAGCATCC 20138 Query 290903 AAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCtttttcc 290962 ||||| || ||||| | ||||||||| |||||||| || || || || |||| || Sbjct 20137 TTTGTTGCTTGTCGTTGAGAATCATTAAAGTAAGCAGGCACAGTTATTACTGCTTGTTTT 20078 Query 290963 actttctttttcaaataattttctgccatttgttttattt 291002 ||| | | || || |||||| ||||||| |||| Sbjct 20077 ACTGTACGTCCTAAGTATGCTTCTGCTGTTTGTTTCATTT 20038 >seq79 Length=147675 Score = 107 bits (118), Expect = 1e-17 Identities = 254/376 (68%), Gaps = 22/376 (6%) Strand=Plus/Plus Query 269140 GCTCTAGAGTGAGTTTTATCGCCCACCATTTGTTTTAAACGCTGATAATATGTCGGACCA 269199 ||||||| ||| | || || | ||||| |||||||| || |||||||| || || || Sbjct 55938 GCTCTAGCATGAATCTTGTCATCAACCATGTGTTTTAAGCGTTGATAATAGGTTGGGCCT 55997 Query 269200 ATAAATATTTT-GACATGCATTTTTTCTCCCGTCATACCATTTGTCATTGTTTCATTTCC 269258 ||||| ||| ||| ||| | | ||| || ||||| ||| ||||||||| Sbjct 55998 ATAAAAATTCGAGACTCTAATTGTCT-TCCAGTATGCCCATTATACATAACTTCATTTCC 56056 Query 269259 CCATGC--TTCATATCC----GTATGAAAC-TAGTTCATCATTTATTTTATTAATATCTA 269311 || | || | | || | ||| ||| || || || |||| | || | | Sbjct 56057 --ATTCCTTTGAAAACCAGCAGCATGTAACCTATTTGAT-----ATTTCTTCAACAGTGA 56109 Query 269312 CACCTGTAAATGGTGTCGCATCACCATATACTCCTTTAATAGCACATACTTTTCCTAATA 269371 | ||| || ||||| |||||||| | | |||| ||||||||| || || | || Sbjct 56110 CTTTTGTGAAAGGTGTAGCATCACCTTCCATGCCTTCAATAGCACAAGTCTTACCGAGTA 56169 Query 269372 GACATTCAATCAATTGTCCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAATAA 269431 ||||||||| | || ||||| ||||| | | || ||| || |||||| ||||| | Sbjct 56170 TACATTCAATAAGATGCCCAATAGTCATTCTTGAAGGAATAGCATGAGGATTCATAATTA 56229 Query 269432 TATCTGGCACAAGTCCAGATTTAGTAAATGGCATATCTGC---TCTATGAATTTTAAATC 269488 ||||||| || | ||| || |||||||||||||||| | ||||| | ||| | Sbjct 56230 TATCTGGTACTATCCCATCTTGAGTAAATGGCATATCTTCCATTCTAT---ATGTAATCC 56286 Query 269489 CAACTGTACCTTTTTG 269504 ||| ||||||||| || Sbjct 56287 CAATTGTACCTTTCTG 56302 >seq61 Length=587635 Score = 100 bits (110), Expect = 2e-15 Identities = 199/284 (70%), Gaps = 22/284 (8%) Strand=Plus/Plus Query 355247 ATCCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAA 355306 ||||||| |||||||| || | || |||||||| | ||||||||| | |||||||| | Sbjct 100358 ATCCAGTACCAATACCATCAGCACCGTTAACTAAGACCATTGGAATGATTGGTACATAGA 100417 Query 355307 ATACTGGTTCAATCATTTTA---TTATCTT-CAAATTGATGTTGCAATACATCAAAATCA 355362 ||| |||||||| || | | ||||| || || || | |||| |||| ||| Sbjct 100418 ATAAAGGTTCAATTTGTTGACCATCATCTTGCAGATATAT-TAACAATGGATCA---TCA 100473 Query 355363 TGTTGTATGAAAATATATTTAGTTAA--TTGATTGAGTTGTGTGAAGATATATCGTGCA- 355419 || | ||||||||| ||| | | ||| | || ||| || || || || ||| Sbjct 100474 GCTTCTGGGAAAATATAACGAGTCCAAGTAGAT--AATTTTGTAAATATGTAACGGGCAG 100531 Query 355420 --CTTGCATTATCTTTGCCTCCA-CTTAATCTTG-TACCAAATTGACCATTGGGAAGTAA 355475 ||||||| | ||||| || ||| || || |||||||||||||| || | | Sbjct 100532 CACTTGCAT---CCTTGCCACCTTCTT--TCCTGCTACCAAATTGACCACATGGCTGAAG 100586 Query 355476 TAAATTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTTTA 355519 ||| || | ||||||||||||||| ||| ||| ||||| |||| Sbjct 100587 TAAGTTCAAATTGTTACTTCCAACAAAATCTTGCGCCATATTTA 100630 Score = 100 bits (110), Expect = 2e-15 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 356436 TCTTACATTTAGTGGTTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAAC 356495 ||| |||||||| |||||||||| |||||||| | |||||||| || | ||| |||| Sbjct 101424 TCTAACATTTAGAAGTTTTCCTTTCAATGGGAATACTCCATAATAGTCACGTCCAACAAT 101483 Query 356496 ATTTAATCCAGACATAGCAA-ATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTAC 356554 | ||| |||| || ||||| ||| ||||| ||||||||||| || || |||| |||| Sbjct 101484 AGATAAGCCAGCCA-AGCAAGATGTCTTAGCCGAATCTCCTTCTGTCAGTATTAGTGTAC 101542 Query 356555 ATTT 356558 |||| Sbjct 101543 ATTT 101546 >seq42 Length=421869 Score = 95.1 bits (104), Expect = 8e-14 Identities = 107/143 (75%), Gaps = 3/143 (2%) Strand=Plus/Plus Query 629945 TTTTATGGACCTCCTGGTACAGGTAAAACATCTGCAATTTTAGCTATGGGACGAGAAATA 630004 || |||||||||||||| |||||||| |||||||||||| | ||| | | || ||| || Sbjct 395018 TTCTATGGACCTCCTGGGACAGGTAAGACATCTGCAATTCTTGCTCTTTGTCGTGAACTA 395077 Query 630005 TTT---AAAGAACATTTTCCAACGAGAGTAATAGAATTTAATGCCTCTGATGATAGAGGA 630061 ||| || || | ||| || | | | ||| | ||||| |||||||| |||||| Sbjct 395078 TTTGGAAATGATGAATTTAGAAATCGTACATTGGAACTGAATGCATCTGATGAAAGAGGA 395137 Query 630062 ATTAATGCAGTTAGAGAAAAAAT 630084 ||||||| |||| | || ||||| Sbjct 395138 ATTAATGTAGTTCGTGAGAAAAT 395160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268173409194980