Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq73 183 5e-41 >seq73 Length=203464 Score = 183 bits (202), Expect = 5e-41 Identities = 189/248 (76%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || ||||| || |||||||| || |||| || |||| | Sbjct 180925 TGCAGATTTTTGTGAAGACTTTAACGGGTAAAACAATAACACTTGAAGTTGAACCATCTG 180866 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||||||||| |||||| ||| ||||||||| |||||||| ||||||| Sbjct 180865 ATACTATTGAAAATGTAAAGGCTAAAATTCAAGATAAAGAAGGGATTCCACCTGATCAAC 180806 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | |||||||| || |||||| | || ||| | | || ||| | |||||||||| Sbjct 180805 AAAGATTAATTTTTGCTGGGAAACAACTTGAGGATGGTCGGACTTTATCTGATTATAATA 180746 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT------AAATAAA 146265 | || || ||||| ||| | |||||||| ||||| |||||||| ||| || |||| Sbjct 180745 TTCAGAAGGAATCAACTCTTCATTTAGTTTTACGTTTAAGAGGTGGTTCTTGCAATTAAA 180686 Query 146266 TATTGAAA 146273 ||||| || Sbjct 180685 TATTGGAA 180678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786165073344200