Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq73 89.7 9e-13 >seq73 Length=203464 Score = 89.7 bits (98), Expect = 9e-13 Identities = 102/139 (73%), Gaps = 11/139 (8%) Strand=Plus/Plus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------- 81696 ||||| |||||||||| |||||||||||||||| ||| | || || || | Sbjct 180727 AGAGTTGATTCCTTCTGAATATTATAATCAGATAAAGTCCGACCATCCTCAAGTTGTTTC 180786 Query 81697 ----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 |||| |||| |||||||||| | || | || |||| ||||||||||| || || Sbjct 180787 CCAGCAAAAATTAATCTTTGTTGATCAGGTGGAATCCCTTCTTTATCTTGAATTTTAGCC 180846 Query 81753 TTTATATTTTCAATCGTAT 81771 |||| ||||||||| |||| Sbjct 180847 TTTACATTTTCAATAGTAT 180865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903409675493600