Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq71 104 2e-17 >seq71 Length=86954 Score = 104 bits (114), Expect = 2e-17 Identities = 180/260 (69%), Gaps = 4/260 (2%) Strand=Plus/Minus Query 126069 ATTGCATCCATATGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCC 126128 ||||| || | |||||| ||||||||| ||||| |||| ||| || ||||| || Sbjct 85970 ATTGC-TCAACATGATTTTCATAAATATGAGCATCACCAATAAAATGTATAAATTCTCCA 85912 Query 126129 ACCTCAAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTG 126188 ||| ||||||| | |||| | | | ||| | |||| ||||||||| Sbjct 85911 GGTTCATATCCACATATATGAGCAATCATAACACATAATAATGAATAAGATGCAATATTA 85852 Query 126189 AAAGGAACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAAT---TTA 126245 || ||| |||||| || |||| |||||||||||||||| ||| ||||| ||| Sbjct 85851 AATGGACATCCTAAACCTAAATCACAACTTCTTTGATATAATGAGCAACTTAATCTATTA 85792 Query 126246 CCCTCTTGTACGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATT 126305 | | || ||||||||| | | | | || ||||||||||||||||| | | ||| Sbjct 85791 TTATTATCAACATAAAATTGAGATAATATATGACAAGGTGGTAATGCCATATATTTCATT 85732 Query 126306 TCAGTAGGATTCCATGCTGA 126325 ||| ||||||||||| || Sbjct 85731 GCAGATGGATTCCATGCAGA 85712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408597727727945