Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= NC_031011.1 Length=168993 Score E Sequences producing significant alignments: (Bits) Value seq71 86.0 7e-12 >seq71 Length=86954 Score = 86.0 bits (94), Expect = 7e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 41152 ACATTAAACTGATAGAACATATGACAAGGCGGTAATGCCATATATTTAAGTTCAGCTGGA 41211 |||| ||| ||| | || ||||||||||| ||||||||||||||||| | | ||| |||| Sbjct 85782 ACATAAAATTGAGATAATATATGACAAGGTGGTAATGCCATATATTTCATTGCAGATGGA 85723 Query 41212 TTCCATGCTGAAACAATTTGACGCCTATCATTTGGCAGTTTTTTAATACGATCAA-TAAC 41270 |||||||| || | || || | ||||||| || ||| |||| |||| ||| Sbjct 85722 TTCCATGCAGATAAGATATGTCTTCTATCATAAGGATTTTTCTTAAGTGATTCAATTAAA 85663 Query 41271 TTCTATAATTTGGTCTACACC 41291 || |||| ||| ||||| || Sbjct 85662 TTTGATAA-TTGATCTACTCC 85643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540648687653800