Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq141 140 3e-28 >seq141 Length=88262 Score = 140 bits (154), Expect = 3e-28 Identities = 503/771 (65%), Gaps = 33/771 (4%) Strand=Plus/Plus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 ||||||| |||| || || | ||| | |||||| ||||| |||||||| || | || Sbjct 19850 AACACCCGCCATTTGATATTCACCAACTCTTTTTTCAAAAAAATTAGTTTTACCTTGAAG 19909 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAG 16782 ||| || ||||| ||||||||||||||||| | ||||||| || | || Sbjct 19910 AGAAATCAAATCCATCCAATCAAAAGGATTAGTAACATTGTATATTTTTGAAATATCAAG 19969 Query 16783 TTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCAT 16842 | | | ||||||||| ||||||||||| |||||||| ||| | | | ||||| Sbjct 19970 AGCAACTAATAATCTATCAGCTACAAATTCAATATATTGTGTCATAAGTCTAGAATTCAT 20029 Query 16843 TCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGC--TCTATAACAACCGCT 16900 || |||||| ||| || | || || || ||| ||| | || | | |||| ||| Sbjct 20030 ACCAATAAGATCTACAGGTAAAGAATC--ACATAAAAAGTTTCTTTCAACATCAACAGCT 20087 Query 16901 TCCTTAATAATACTAGCAACTCGTTC-CTCGGA--CGG---TGTATGTTTAAGATGTTTA 16954 || | ||| | | | | || | || | | || | || |||||| |||| Sbjct 20088 TC--TGATATAATTTG----TTGTACTCTAGAAATTGGTAATTTAAATTTAAGTGATTTA 20141 Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 | || | ||| || ||||| |||||| || || || | || || | ||| |||||| Sbjct 20142 TAAATTAAACAAGCAAAATCTGCATGTAAACCTTCATCACGACTAATTAATTCATTAGAA 20201 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 ||||| | || ||||| ||| ||||| |||||||||||||| || ||| ||| Sbjct 20202 AATGTAAGACCAGGCATTAATCCACGTTTTTTTAACCAAAATATAGCACAGAAACTACCA 20261 Query 17075 GAAAAGAATATACCCTCGACGGATGCA---AACGCGATTAATCGTTCGGCGTACGTCGCG 17131 ||||| || ||||| || || |||| || | ||||||| ||| || | | Sbjct 20262 GAAAATAAAATACCTTCAAC---TGCACAGAATCCAATTAATCTTTCAGCAAATGAACGA 20318 Query 17132 TCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTA-TGCAATC--CATC 17188 || || || |||||||| |||| || ||||||| || | ||| ||| ||| Sbjct 20319 TCATTATT---CATCCATTTTGTTGCCCATTCTGCTTTTTTTTTAACTGC-ATCAACATG 20374 Query 17189 GTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATG 17248 | ||| || | |||||| | | ||||| | || ||||||| ||| || Sbjct 20375 AGT--TATAGCTTCAAATAACATTTGACGTTCCTTAATATCACTTATATATTGATCTATA 20432 Query 17249 AGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCAT 17308 |||| || |||| |||||| | || || || || |||||| | ||| | | Sbjct 20433 AGTAATGAATAAGTTTCATTGTGTATTTGTTCAATAGCCATTTGAAATGCATAATACATT 20492 Query 17309 CGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT-CCGCTAGATTTTCGTTCACGAT 17367 | ||||| | ||||| | || | | || || || | || |||||||| | || || Sbjct 20493 CTTGCTTCAGTAATTTGTA-TTTCTCTTAAAAAATTTACAGCAAGATTTTCCATAACAAT 20551 Query 17368 GCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTC 17418 || || || || || ||||| || | | || ||||| |||| |||||| Sbjct 20552 TCCATCACTTGCAGCAAAAAATGCAAGAACATATTTAATAAAATGTTTTTC 20602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544661948600